Job Description P76017 Confidence 99.12% Date Thu Jan 5 12:17:29 GMT 2012 Rank 15 Aligned Residues 147 % Identity 19% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		771	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	G	F	Y	S	D	L	V	I	K	A	S	R	Q	K	N	S	F	H	V	L	D	S	Q	N	N	G	V	N	A	N	G	T	A	N	G	M	S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	G
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.			.	.	.	.														.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.			.	.	.	.														.	.	.	.	.	.
Template Sequence		A	S	G	F	Y	V	Q	A	D	A	A	H	A	K	A	S	S	S	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	.	.	.	.	.	.	D	L	.	.	.	.	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	.	.	.	.	.	.
Template Known Secondary structure																			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.																T	.	.	.	.	.	.	T		.	.	.	.												S	S	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.			.	.	.	.														.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.														.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40					.	.	.	.	.	.	.	.	.	50	.	.	.
		851	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A	G	N	S	Q	L	N	V	Y	V	K	T	G	A	I	R	E	F	S	G	D	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y	N	K	Q	H	T	F
Query Conservation
Alig confidence		.	.	.	.																									.																											.	.	.	.
Template Conservation		.	.	.	.																									.																											.	.	.	.
Template Sequence		.	.	.	.	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	.	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	S	F	S	Q	.	.	.	.	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L
Template Known Secondary structure		.	.	.	.			S	S																		S	S	S	.																			T	T							.	.	.	.																	T	T
Template Predicted Secondary structure		.	.	.	.																									.																											.	.	.	.
Template SS confidence
						54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		931	.	.	.	.	.	.	.	.							940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		Y	L	E	A	D	Y	T	Q	G	.	.	.	.	.	.	N	L	F	D	Q	K	Q	V	N	G	G	Y	R	F	S	F
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	E	L	S	A	G	V	R	V	K	F
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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