Job Description P76017 Confidence 99.38% Date Thu Jan 5 12:17:29 GMT 2012 Rank 7 Aligned Residues 526 % Identity 17% Template d1daba_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Virulence factor P.69 pertactin Resolution 2.50

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	D	T	A	D	P	S	G	N	L	Y	G	V	M	T	P	A	G	N	T	P	G	N	I	N	L	G	N	D	V	T	V	N	V	N	D	A	S	G	Y	A	K	G	I	I	I	Q	G	K	N	S	S	L	T	A	N	R	L	T	V	D	V	V	G	Q	T	S	A	I	G	I	N	L	I	G	D	Y	T
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		W	N	N	Q	S	I	V	K	T	G	E	R	Q	H	G	I	H	I	Q	G	S	D	P	G	G	V	R	T	A	S	G	T	T	I	K	V	S	G	R	Q	.	.	A	Q	G	I	L	L	E	N	P	A	A	E	L	Q	F	R	N	G	S	V	T	S	S	G	Q	L	S	D	D	G	I	R	R	F	L	G	T	V
Template Known Secondary structure				S							S	T	T			S					T	T	S									S							S	T	T	.	.			S														S							S			B		S	S	S	S		B			S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		H	A	D	L	G	T	G	S	T	I	K	S	N	D	D	G	I	I	I	G	H	S	S	T	L	T	A	T	Q	F	T	I	E	N	S	N	G	I	G	L	.	.	.	.	.	.	.	.	T	I	N	D	Y	G	T	S	V	D	L	G	S	G	S	K	I	T	T	D	G	S	T	G	V	Y	I	G	G	L	N	G
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	K	A	G	K	L	V	A	D	H	A	T	L	A	N	V	G	D	T	W	D	D	D	G	I	A	L	Y	V	A	G	E	Q	A	Q	A	S	I	A	D	S	T	L	Q	G	A	G	G	V	Q	I	E	R	G	A	N	V	T	V	Q	R	S	A	I	V	D	G	G	L	H	I	G	A	L	Q	S	L	Q	P
Template Known Secondary structure												S							S		T	T	T	S									S	T	T							S					S	T	T						T	T							S					S	B							S	S			S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	N	G	A	A	R	F	T	A	T	D	L	T	I	D	V	Q	G	Y	S	A	M	G	I	N	V	Q	K	N	S	V	V	D	L	G	T	N	S	T	I	K	T	N	G	D	N	A	H	G	L	W	S	F	G	Q	V	S	A	N	A	L	T	V	D	V	T	G	A	A	A	N	G	V	E	V	R	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	L	P	P	S	R	V	V	L	R	D	T	N	V	T	A	V	P	A	S	G	A	P	A	A	V	S	V	L	G	A	S	E	L	T	L	D	G	G	H	I	T	G	G	R	A	A	G	V	A	A	M	Q	G	A	V	V	H	L	Q	R	A	T	I	R	R	G	D	A	L	A	G	G	A	V	P	G	G	A
Template Known Secondary structure				S									S							T	T	S			S							S	S														S	S							S	S												S						S	S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	T	I	G	A	D	S	H	I	S	S	A	Q	G	G	G	L	V	T	S	G	S	D	A	I	I	N	F	T	G	T	A	A	Q	R	N	S	I	F	S	G	G	S	Y	G	A	S	A	Q	T	A	T	A	V	V	N	M	Q	N	T	D	I	T	V	D	R	N	G	S	L	A	L	G	L	W	A	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	G	G	A	V	P	G	G	F	G	P	G	G	F	G	P	V	L	D	G	W	Y	G	V	D	V	S	G	S	S	V	E	L	A	Q	S	I	V	E	A	P	E	L	G	A	A	I	R	V	G	R	G	A	R	V	T	V	P	G	G	S	L	S	A	P	H	G	N	V	I	E	T	G	G	A	R	R	F	A
Template Known Secondary structure				S					S	S	S			S	S				S	S		S								S	S						S							S	S								T	T							S	S																S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	T	G	D	S	L	A	I	T	G	A	A	G	A	R	G	I	Y	A	M	T	N	S	Q	I	D	L	T	S	D	L	V	I	D	M	S	T	P	D	Q	M	A	I	A	T	Q	H	D	D	G	Y	A	A	S	R	I	N	A	S	G	R	M	L	I	N	G	S	V	L	S	K	G	G	L	I	N	L	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	A	A	P	L	S	I	T	L	Q	A	G	A	H	A	Q	G	K	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	V	L	P	E	P	V	K	L	T	L	T	G	G	A	D	A	Q	G	D	I	V	A	T	E	L	P	S	I	P	G	T	S	I
Template Known Secondary structure		S	S	S									T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S									T	T											S		S	S	S		G	G	G	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.																								.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	P	G	S	V	W	T	G	S	S	L	S	D	N	V	N	G	G	K	L	D	V	A	M	N	N	S	V	W	N	V	T	S	N	S	N	L	D	T	L	A	L	S	H	S	T	V	D	F	A	S	H	G	S	T	A	G	T	F	A	T	L	N	V	E	N	L	S	G	N	S	T	F	I	M	R	A	D	V
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		G	P	L	D	V	A	L	A	S	Q	A	R	W	T	G	A	T	R	A	V	D	S	L	S	I	D	N	A	T	W	V	M	T	D	N	S	N	V	G	A	L	R	L	A	S	D	G	S	V	D	F	Q	Q	P	A	E	A	G	R	F	K	V	L	T	V	N	T	L	A	G	S	G	L	F	R	M	N	V	.	.
Template Known Secondary structure										T	T							B	S									S							S											T	T									S	S	T	T																					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.				.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610		.	.
Predicted Secondary structure																																																									.	.	.																				.
Query SS confidence																																																									.	.	.																				.
Query Sequence		V	G	E	G	N	G	V	N	N	K	G	D	L	L	N	I	S	G	S	S	A	G	N	H	V	L	A	I	R	N	Q	G	S	E	A	T	T	G	N	E	V	L	T	V	V	K	T	T	D	G	A	A	S	F	S	.	.	.	A	S	S	Q	V	E	L	G	G	Y	L	Y	D	V	R	K	N	G	T	.	N	W
Query Conservation																																																									.	.	.																				.
Alig confidence		.	.	.	.																																																				.	.	.																				.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	F	A	D	L	G	L	S	D	K	L	V	V	M	Q	D	A	S	G	Q	H	R	L	W	V	R	N	S	G	S	E	P	A	S	A	N	T	L	L	L	V	Q	T	P	L	G	S	A	A	T	F	T	L	A	N	K	D	G	K	V	D	I	G	T	Y	R	Y	R	L	A	A	N	G	N	G	Q	W
Template Known Secondary structure		.	.	.	.		G	G	G	T													S										S				S	S											S	S									S	G	G	G					T	T									S	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		613	.	.	.	.	.	.	620	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Y	A	S	G	T	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	V	G	A	K	A	P	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.