Job Description P76017 Confidence 57.94% Date Thu Jan 5 12:17:29 GMT 2012 Rank 46 Aligned Residues 176 % Identity 10% Template d1af6a_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	Y	S	G	I	Q	F	G	G	D	K	R	L	S	D	V	M	P	L	Y	V	G	L	Y	I	G	S	T	H	A	S	P	D	Y	S	G	G	D	G	T	A	R	S	D	Y	M	G	M	Y	A	S	Y	M	A	Q	N	G	F	Y	S	D	L	V	I	K	A	S	R	Q	K	N	S	F	H	V	L	D	S	Q
Query Conservation
Alig confidence																																.																																											.	.	.	.	.	.	.
Template Conservation																																.																																											.	.	.	.	.	.	.
Template Sequence		F	N	K	F	V	V	Q	Y	A	T	D	S	M	T	S	Q	G	K	G	L	S	Q	G	S	G	V	A	F	D	N	.	E	K	F	A	Y	N	I	N	N	N	G	H	M	L	R	I	L	D	H	G	A	I	S	M	G	D	N	W	D	M	M	Y	V	G	M	Y	Q	D	I	N	W	D	.	.	.	.	.	.	.
Template Known Secondary structure												G	G	G	T	T	T		S	S					S						T	.	T																								T	T	T															T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																																											.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	G	V	N	A	N	G	T	A	N	G	M	S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	G	L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A
Query Conservation
Alig confidence		.	.	.	.	.																						.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																						.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	N	D	N	G	T	K	W	W	T	V	G	I	R	P	M	Y	K	W	T	P	I	.	.	.	.	.	.	.	M	S	T	V	M	E	I	G	Y	D	N	V	E	S	Q	R	T	G	D	K	N	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	I	T	L	A	Q	Q	W	Q	A
Template Known Secondary structure		.	.	.	.	.	T	S																S	S	S	S	.	.	.	.	.	.	.															T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.											S
Template Predicted Secondary structure		.	.	.	.	.																						.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.														.	.	.	.	.	.	.	350	.	.	.
		876	.	.	.	880		.	.	.	.	.	.	.	.	.	890	.	.	.	.	.																	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.
Predicted Secondary structure							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	S	Q	L	.	N	V	Y	V	K	T	G	A	I	R	E	F	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y
Query Conservation							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	S	I	W	S	R	P	A	I	R	V	F	A	T	Y	A	K	W	D	E	K	W	G	Y	D	Y	T	G	N	A	D	N	N	A	N	F	G	K	A	V	P	A	D	F	N	G	G	S	F	G	R	G	D	S	D	E	W	T	F	G	A	Q	M	E	I
Template Known Secondary structure		S	S	S	T	T		S															S							S		T	T	T		T	T	T	T					T	T	G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions