Job Description P76017 Confidence 28.41% Date Thu Jan 5 12:17:29 GMT 2012 Rank 51 Aligned Residues 150 % Identity 12% Template c3fidA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:putative outer membrane protein (lpxr); PDBTitle: lpxr from salmonella typhimurium Resolution 1.90 Å

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		804	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.				.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		T	A	N	G	M	S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	G	L	N	I	H	L	.	.	.	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A	G	N	S	Q	L
Query Conservation																																																						.	.	.
Alig confidence																																															.							.	.	.
Template Conservation																																															.
Template Sequence		N	R	Y	G	Y	T	A	K	G	M	V	S	L	T	P	A	I	D	I	L	G	V	N	V	G	F	Y	P	E	V	S	A	V	G	G	N	L	F	Q	Y	L	G	Y	G	A	.	T	V	A	L	G	N	D	K	T	F	N	S	D	N	G	F	G	L	L	S	R	R	G	L	I	H	T	Q	K	E	G	L	I	Y
Template Known Secondary structure																					T	T															S	S									.						S						T					G	G	G			T	T								S
Template Predicted Secondary structure																																															.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.			.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940				.	.	.	.	.	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure																	.	.																																														.	.	.
Query SS confidence																	.	.																																														.	.	.
Query Sequence		N	V	Y	V	K	T	G	A	I	R	E	F	S	G	D	.	.	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y	N	K	Q	H	T	F	Y	L	E	A	D	Y	T	Q	G	N	.	.	.	L	F	D	Q	K	Q	V	N	G	G	Y	R	F	S	F
Query Conservation																	.	.																																														.	.	.
Alig confidence																	.	.																														.																.	.	.
Template Conservation																																																.
Template Sequence		K	V	F	A	G	V	E	R	R	E	V	D	K	N	Y	T	L	Q	G	K	T	L	Q	T	K	M	E	T	V	D	I	N	K	T	V	D	E	Y	R	V	G	A	T	I	G	Y	.	S	P	V	A	F	S	L	S	L	N	K	V	T	S	E	F	R	T	G	D	D	Y	S	Y	I	N	G	D	I	T	F	F	F
Template Known Secondary structure																				S		B	T	T	T							B		S														.	T	T													S	B	T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions