Job Description P76017 Confidence 100.00% Date Thu Jan 5 12:17:29 GMT 2012 Rank 2 Aligned Residues 271 % Identity 25% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	K	P	T	T	T	A	D	A	G	G	N	Y	L	N	V	G	Y	L	L	N	Y	V	E	N	R	T	L	M	Q	R	M	G	D	L	R	N	Q	S	K	D	G	N	I	W	L	R	S	Y	G	G	S	L	D	S	F	A	S	G	K	L	S	G	F	D	M	G	Y	S	G	I	Q	F	G	G	D	K	R	L
Query Conservation
Alig confidence																																																												.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		M	A	R	N	D	G	Q	G	K	A	A	A	T	F	M	H	I	S	Y	N	N	F	I	T	E	V	D	N	L	N	K	R	M	G	D	L	R	D	I	N	G	E	A	G	T	W	V	R	L	L	N	G	S	G	S	A	D	G	.	.	.	.	.	G	F	T	D	H	Y	T	L	L	Q	M	G	A	D	R	K	H
Template Known Secondary structure																										T												T	T				S															S	T	.	.	.	.	.	T
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		1074	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.						.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.
			730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	D	V	M	P	L	Y	V	G	L	Y	I	G	S	T	H	A	S	P	D	Y	S	G	G	D	G	T	A	R	S	D	Y	M	G	M	Y	A	S	Y	M	A	Q	N	G	F	Y	S	D	L	V	I	K	A	S	R	Q	K	N	S	F	H	V	L	D	S	Q	N	N	G	V	N	A	N	G	T	A	N	G	M
Query Conservation		.
Alig confidence		.																																																															.	.
Template Conservation																																																																	.	.
Template Sequence		E	L	G	S	M	D	L	F	T	G	V	M	A	T	Y	T	D	T	D	A	S	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	.	.	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L
Template Known Secondary structure				T	T																			T	T																			T	T	S																			.	.	S	S	T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		1149	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.			.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	G	L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A	G	N	S	Q	L	N	V	Y	V	K	T	G	A
Query Conservation
Alig confidence																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	.	.	.	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	.	.	.	.	.	.	.	.	.	.	.	.	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S	G	K	D	.	.	W	S	L	T	A	R	A	G	L
Template Known Secondary structure															T	.	.	.	T																						.	.	.	.	.	.	.	.	.	.	.	.																	S	S	.	.
Template Predicted Secondary structure																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		1227	.	.	1230	.	.	.	.	.	.	.	.	.	1240				.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.													.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280			.	.	.	.	.	.	.	.	.
		889	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.		.	.	.	950	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		I	R	E	F	S	G	D	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y	N	K	Q	H	T	F	Y	L	E	A	D	Y	T	Q	G	N	L	F	D	Q	K	Q	.	V	N	G	G	Y	R	F	S	F
Query Conservation																																																												.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Y	E	F	D	L	T	D	.	.	.	.	.	.	.	.	.	.	.	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D	A	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure								S		.	.	.	.	.	.	.	.	.	.	.																		T	T	T												S		S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1305	.	.	.	.	1310	.	.												.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions