Job Description P76017 Confidence 3.48% Date Thu Jan 5 12:17:29 GMT 2012 Rank 88 Aligned Residues 193 % Identity 11% Template c2y0lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo Resolution 2.59 Å

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		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	F	G	G	D	K	R	L	S	D	V	M	P	L	Y	V	G	L	Y	I	G	S	T	H	A	S	P	D	Y	S	G	G	D	G	T	A	R	S	D	Y	M	G	M	Y	A	S	Y	M	A	Q	N	G	F	Y	S	D	L	V	I	K	A	S	R	Q	K	N	S	F	H	V	L	D	S	Q	N	N	G	V	N
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																	.																.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																	.																.	.	.	.	.	.	.
Template Sequence		D	L	G	G	L	D	Y	K	L	T	D	Q	L	T	A	S	Y	H	Y	S	N	L	Q	D	V	.	.	.	.	.	.	.	.	.	.	.	Y	R	Q	H	F	V	G	L	L	H	S	W	P	I	G	P	.	G	E	L	T	S	D	L	R	F	A	R	S	T	D	S	.	.	.	.	.	.	.	G	S	A	K	A
Template Known Secondary structure											S	S	S											T	T	T	.	.	.	.	.	.	.	.	.	.	.															S	S	.	S															.	.	.	.	.	.	.	T	T		T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																	.																.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.								.	.	250	.	.
		801	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.									850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		A	N	G	T	A	N	G	M	S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	.	.	.	.	.	.	.	.	G	L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.					.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.					.	.	.	.
Template Sequence		G	G	I	D	N	K	S	L	N	G	M	F	T	Y	S	L	.	.	.	.	.	.	.	.	G	N	H	A	.	.	.	.	F	G	A	A	W	Q	R	M	N	G	D	D	A	F	P	Y	L	E	G	S	N	P	Y	L	V	N	F	V	Q	V	N	D	F	A	G	P	K	E	R	S	W	Q	L	R	Y	D	Y	D
Template Known Secondary structure																		.	.	.	.	.	.	.	.	T	T			.	.	.	.										S	S	S					B	T	T						T	T			S	S					S	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.					.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		873	.	.	.	.	.	.		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.					.	.	.	.	930				.	.	.	.	.	.	.	.	.	940	.	.	.	.
Predicted Secondary structure									.																																															.	.	.	.						.	.	.
Query SS confidence									.																																															.	.	.	.						.	.	.
Query Sequence		I	T	A	G	N	S	Q	.	L	N	V	Y	V	K	T	G	A	I	R	E	F	S	G	D	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y	N	.	.	.	.	K	Q	H	T	F	.	.	.	Y	L	E	A	D	Y	T	Q	G	N	L	F	D	Q
Query Conservation									.																																															.	.	.	.						.	.	.
Alig confidence									.																				.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.						.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	G	L	G	I	P	G	L	T	F	M	T	R	Y	V	K	G	D	N	V	E	L	A	G	Q	G	.	.	.	.	.	.	.	.	.	.	.	E	G	R	E	W	E	R	N	T	E	L	Q	Y	V	F	Q	S	G	A	L	K	N	L	G	I	R	W	R	N	A	T	F	R	S	N	F	T	R	D	I	D	E
Template Known Secondary structure		G	G	G	G	T		T	T																S				.	.	.	.	.	.	.	.	.	.	.																	S	S	T	T	T	T													S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.												.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		945	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	V	N	G	G	Y	R	F	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	L	I	V	S	Y	T	L	P	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions