Return to main results Retrieve Phyre Job Id

Job DescriptionP76017
Confidence87.89%DateThu Jan 5 12:17:29 GMT 2012
Rank43Aligned Residues121
% Identity13%Templatec2hdiA_
PDB info PDB header:protein transport,antimicrobial proteinChain: A: PDB Molecule:colicin i receptor; PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   805....810.........820.........830.........840.........850.........860.........870.........880....
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  ANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQNEMTMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNVYV
Query Conservation        
 
 

            


 


 
         
  
  
      
   
 
               

 
Alig confidence 


















.....






















......




















.




Template Conservation        
 
          .....        
          
  
......   
         
       .     
Template Sequence  NKARIQGVETELKIPFNDE. . . . . WKLSINYTYNDGRDVSNGENKPL. . . . . . SDLPFHTANGTLDWKPLALED. WSMYM
Template Known Secondary structure 
SSS.....

TT

......

SS
TT.
Template Predicted Secondary structure 




.....







......









.
Template SS confidence 















































































   524.....530.........540.. .......550.........560..... ....570.........580...... ...590.
 
   885....890.........900.........910.........920.........930.........940..... ....950.....
Predicted Secondary structure 























....
Query SS confidence 




























































. . . .









Query Sequence  KTGAIREFSGDTEYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQK. . . . QVNGGYRFSF
Query Conservation         
                        
 
                   
      ....    
 
  
Alig confidence 







..................


































....









Template Conservation     
    ..................  
   
    
       
   
 

 
  
     

       
 
Template Sequence  SGHYTGQK. . . . . . . . . . . . . . . . . . GGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRNEDGRRYFMAVDYRF
Template Known Secondary structure 


..................

TTSTT











Template Predicted Secondary structure 

..................


















Template SS confidence 










































































   592....... 600.........610.........620.........630.........640........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions