Job Description P76017 Confidence 99.15% Date Thu Jan 5 12:17:29 GMT 2012 Rank 13 Aligned Residues 162 % Identity 17% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	N	G	F	Y	S	D	L	V	I	K	A	S	R	Q	K	N	S	F	H	V	L	D	S	Q	N	N	G	V	N	A	N	G	T	A	N	G	M	S	I	S	L	E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.					.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.					.	.	.	.
Template Sequence		E	A	G	E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	G	G	G	F	S	V	T	N	.	.	.	.	.	.	.	.	.	.	.	N	T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	.	.	.	.	.	I	G	V	E	.	.	.	.	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A
Template Known Secondary structure			T	T																								.	.	.	.	.	.	.	.	.	.	.														T	T	.	.	.	.	.					.	.	.	.					S									T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.					.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.												.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.					.	.	.	.	.	.	.	920	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		G	L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A	G	N	S	Q	L	N	V	Y	V	K	T	G	A	I	R	E	F	S	G	D	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	.	.	.	.	G	W	N	N	G	V	G	V	S	A	Q	Y	N
Query Conservation																																																																	.	.	.	.
Alig confidence													.	.	.	.																																																	.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		T	G	D	I	A	T	V	H	H	L	P	.	.	.	.	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N
Template Known Secondary structure		T											.	.	.	.										S		T	T		S																										T	T																							S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		926	.	.	.	930	.	.	.	.	.	.	.	.	.	940																	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	H	T	F	Y	L	E	A	D	Y	T	Q	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	D	Q	K	Q	V	N	G	G	Y	R	F	S	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure		S	S																					S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions