Job Description P76017 Confidence 4.77% Date Thu Jan 5 12:17:29 GMT 2012 Rank 79 Aligned Residues 128 % Identity 14% Template c1qd6C_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:protein (outer membrane phospholipase (ompla)); PDBTitle: outer membrane phospholipase a from escherichia coli Resolution 2.10 Å

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		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		E	A	G	Q	R	F	N	L	S	P	T	G	Y	G	F	Y	I	E	P	Q	T	Q	L	T	Y	S	H	Q	N	E	M	T	M	K	A	S	N	G	L	N	I	H	L	N	H	Y	E	S	L	L	G	R	A	S	M	I	L	G	Y	D	I	T	A	G	N	S	Q	L	N	V	Y	V	K	T	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																				.														.	.	.	.	.	.	.	.	.									.																									.	.	.	.	.	.
Template Conservation																				.														.	.	.	.	.	.	.	.	.									.
Template Sequence		Q	L	F	L	G	F	A	T	D	Y	R	F	A	G	W	T	L	R	.	D	V	E	M	G	Y	N	H	D	S	N	G	R	.	.	.	.	.	.	.	.	.	S	D	P	T	S	R	S	W	.	N	R	L	Y	T	R	L	M	A	E	N	G	N	W	L	V	E	V	K	P	W	Y	V	V	G	N	T	D	D	N
Template Known Secondary structure														T	T					.														.	.	.	.	.	.	.	.	.		T	T	S					.												T	T												S			T	T	S
Template Predicted Secondary structure																				.														.	.	.	.	.	.	.	.	.									.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
														887	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940				.	.	.	.	.	.	.	.	.	950	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	R	E	F	S	G	D	T	E	Y	L	L	N	N	S	R	E	K	Y	S	F	K	G	N	G	W	N	N	G	V	G	V	S	A	Q	Y	N	K	Q	H	T	F	Y	L	E	A	D	Y	T	Q	G	N	.	.	.	L	F	D	Q	K	Q	V	N	G	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																																											.	.	.
Template Conservation																						.	.	.	.
Template Sequence		P	D	I	T	K	Y	M	G	Y	Y	Q	L	K	I	G	Y	H	L	G	D	.	.	.	.	A	V	L	S	A	K	G	Q	Y	N	W	N	T	G	Y	G	G	A	E	L	G	L	S	Y	P	I	T	K	H	V	R	L	Y	T	Q	V	Y	S	G	Y	G	E	S	L	I	D	Y	N	F	N	Q	T	R	V	G	V
Template Known Secondary structure		T	T							S										T	T	.	.	.	.											T	T	T															T	T													S	S	G	G	G	T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		952	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	M	L
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions