 |
Job Description | P13036 | Confidence | 6.17% | Date | Thu Jan 5 11:33:31 GMT 2012 |
Rank | 69 | Aligned Residues | 56 |
% Identity | 16% | Template | d2ctma1 |
SCOP info | Eukaryotic type KH-domain (KH-domain type I)
| Eukaryotic type KH-domain (KH-domain type I)
| Eukaryotic type KH-domain (KH-domain type I)
|
Resolution | UNK |
|
 |
  |   |
33 | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . |  |  |
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | Q | V | N | I | A | P | . |
. |
. |
. |
. |
. |
. |
G | S | L | D | K | A | L | N | Q | Y | A | A | H | S | G | F | T | L | S | V | D | A | S | L | T | R | G | K | Q | S | N | G | L | H | G | . |
D | Y | D | V | E | S | G | L | Q | Q | L | L | D |
Query Conservation |   |
  |   |   |   |   |
|   |
| . | . | . | . | . | . | . |
|
|
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
| . |   |   |
|   |   |   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
S | E | D | V | P | L | D | H | R | V | H | A | R | I | I | G | A | R | G | K | A | I | R | K | I | M | D | E | F | K | V | D | I | R | F | P | Q | S | G | A | P | D | P | N | C | V | T | V | T | G | L | P | E | N | V | E | E | A | I | D | H | I | L | N |
Template Known Secondary structure |   |
|  |  |  |  |
|
| T | T | T |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  | T |
|  |  |  |
|
|
| T | T |
| S |
| T | T |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|