Job Description P13036 Confidence 25.63% Date Thu Jan 5 11:33:31 GMT 2012 Rank 42 Aligned Residues 134 % Identity 12% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	S	G	N	V	E	P	E	K	A	R	T	W	E	L	G	T	R	Y	D	D	G	A	L	T	A	E	M	G	L	F	L	I	N	F	N	N	Q	Y	D	S	N	Q	T	N	D	T	V	T	A	R	G	K	T	R	H	T	G	L	E	T	Q	A	R	Y	D	L	G	T	L	T	P	T	L	D	N	V	S
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R
Template Known Secondary structure		G	T	T	S	S	S	S		S	S														T	T												S		S			S	S	S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.																.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.		.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		I	Y	A	S	Y	A	Y	V	N	A	E	I	R	E	K	G	D	T	Y	G	N	L	V	P	F	S	P	K	H	K	G	T	L	G	V	D	Y	K	P	.	G	N	W	T	F	N	L	N	S	D	F	Q	S	S	Q	F	A	D	N	A	N	T	V	K	E	S	A	D	G	S	T	G	R	I	P	G	F	M	L	W
Query Conservation																																									.
Alig confidence																							.	.	.	.	.	.													.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	D	E	D	L	.	.	.	.	.	.	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	.	.	.	.	.	.	.	.	.	.	.	.	I	V
Template Known Secondary structure													S	B	T	T	T	B					.	.	.	.	.	.												S	S	S	S														S	S		T	T							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330													.	.
		718	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	V	A	Y	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	G	M	T	Y	Q	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions