Job Description P13036 Confidence 6.63% Date Thu Jan 5 11:33:31 GMT 2012 Rank 63 Aligned Residues 151 % Identity 8% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.									.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.														.	.	670	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	G	L	E	T	Q	A	R	Y	D	L	G	T	L	T	P	T	L	D	N	V	S	I	Y	A	S	Y	A	Y	V	N	A	E	I	R	.	.	.	.	.	.	.	.	E	K	G	D	T	Y	G	N	L	V	P	F	S	P	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	T	L	G	V	D
Query Conservation																																						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	A	N	E	F	D	L	N	I	K	G	W	L	L	N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S
Template Known Secondary structure																			S	S																									B			T	T		S	S		B			B			T	T		S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.					.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	K	P	G	N	W	T	F	N	L	N	S	D	F	Q	S	S	Q	F	A	D	N	A	N	T	V	K	E	S	A	D	G	.	.	.	.	S	T	G	R	I	P	G	F	M	L	W	G	A	R	V	A	Y	D	F	G	P	Q	M	A	D	L	N	L	A	F	G	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.
Template Sequence		Y	R	Y	E	D	F	E	L	G	G	T	F	K	Y	S	G	W	V	E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	.	.	.	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T
Template Known Secondary structure					T	T																								S	S	S																										.	.	.	T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
					739	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	N	I	F	D	Q	D	Y	F	I	R	S	Y	D	D	N	N	K	G	I	Y	A	G	Q	P	R	T	L	Y	M	Q	G	S	L	K	F
Query Conservation		.	.	.
Alig confidence		.	.	.																						.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A	G	I	E	N	Y	N	F	.	.	.	.	.	I	T	T	A	G	L	K	Y	T	F
Template Known Secondary structure						T	T	T	T																	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions