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Job DescriptionP13036
Confidence7.98%DateThu Jan 5 11:33:31 GMT 2012
Rank58Aligned Residues184
% Identity13%Templatec3sljA_
PDB info PDB header:protein transportChain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   569570.........580... ......590.........600.........610.........620.........630.........640.......
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Query Sequence  KARTWELGTRYDDGA. LTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVN
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Template Sequence  KSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTA. . . . . TFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVY
Template Known Secondary structure  TTS.....SSTT

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   1101........1110.........1120.........1130.... .....1140.........1150.........1160.........1170.....
 
   648.650... ......660.........670.........680.........690.........700.........710...
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Query Sequence  AEIREK. . . . . . . . . . . GDTYGNLVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPG. . .
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Template Sequence  GSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGYQFDLLANGETVLRDASGEKRIKGEKD
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   1176...1180.........1190.........1200.........1210.........1220.........1230.........1240.........1250.....
 
   714.....720.........730.........740.........750.........760.........770....
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Query Sequence  . FMLWGARVAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF
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Template Sequence  SRMLMSVGLNAEIR. . . DNVRFGLEFEKSAFGKYNVDN. . . . . . . . . . . . . . AVNANFRYSF
Template Known Secondary structure  T...TTSSS..............
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   1256...1260......... 1270.........1280.........1290 .........1300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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