Job Description P13036 Confidence 91.80% Date Thu Jan 5 11:33:31 GMT 2012 Rank 23 Aligned Residues 73 % Identity 18% Template c3ezjA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:general secretion pathway protein gspd; PDBTitle: crystal structure of the n-terminal domain of the secretin gspd from2 etec determined with the assistance of a nanobody Resolution 2.80 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		F	A	A	Q	V	N	I	A	P	G	S	L	D	K	A	L	N	Q	Y	A	A	H	S	G	F	T	L	S	V	D	A	S	L	T	R	G	K	Q	S	N	G	L	H	G	D	Y	D	V	E	S	G	L	Q	Q	.	.	.	L	L	D	G	S	G	L	Q	V	K	P	L	G	N	N	S	W	T	L	E	P	A	P
Query Conservation																																																								.	.	.
Alig confidence																															.	.	.	.																						.	.	.
Template Conservation																															.	.	.	.
Template Sequence		A	T	F	T	A	N	F	K	D	T	D	L	K	S	F	I	E	T	V	G	A	N	L	N	K	T	I	I	M	.	.	.	.	V	Q	G	A	V	S	I	R	T	M	T	P	L	N	E	R	Q	Y	Y	Q	L	F	L	N	L	L	E	A	Q	G	Y	A	V	V	P	M	E	N	D	V	L	K	V	V	K	S	G
Template Known Secondary structure				B																					T						.	.	.	.										S	S		B																T	T							T	T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions