Job Description P13036 Confidence 79.43% Date Thu Jan 5 11:33:31 GMT 2012 Rank 28 Aligned Residues 72 % Identity 11% Template c2y3mA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:protein transport protein hofq; PDBTitle: structure of the extra-membranous domain of the secretin2 hofq from actinobacillus actinomycetemcomitans Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	A	A	Q	V	N	I	A	P	G	S	L	D	K	A	L	N	Q	Y	A	A	H	S	G	F	T	L	S	V	D	A	S	L	T	R	G	K	Q	S	N	G	L	H	G	D	Y	D	V	E	S	G	L	Q	Q	L	L	D	G	S	G	L	Q	V	K	P	L	G	N	N	S	W	T	L	E	P	A	P
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		Q	N	P	V	F	S	I	R	L	K	Q	A	P	L	V	P	T	L	Q	Q	L	A	L	A	H	N	T	N	L	I	I	D	.	.	.	.	.	.	.	T	V	S	L	Q	L	E	N	V	D	L	D	Q	L	F	R	S	V	A	K	I	K	Q	L	D	L	W	Q	E	N	G	I	Y	Y	F	T	K	A	Q	L
Template Known Secondary structure																						S				T	T							.	.	.	.	.	.	.									S														T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions