Job Description P13036 Confidence 12.28% Date Thu Jan 5 11:33:31 GMT 2012 Rank 46 Aligned Residues 211 % Identity 12% Template c2qtkB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable porin; PDBTitle: crystal structure of the outer membrane protein opdk from2 pseudomonas aeruginosa Resolution 2.80 Å

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		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	L	Y	H	L	T	D	S	W	N	L	Y	A	N	T	E	G	S	F	G	T	V	Q	Y	S	Q	I	G	K	A	V	Q	S	G	N	V	E	P	E	K	A	R	T	W	E	L	G	T	R	Y	D	D	G	A	L	T	A	E	M	G	L	F	L	I	N	F	N	N	Q	Y	D	S	N	Q	T	N	D	T
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		F	A	V	V	S	R	E	L	P	G	L	A	L	Q	A	G	R	F	D	A	V	S	L	R	N	S	A	D	M	Q	D	L	S	A	W	S	A	P	T	Q	K	S	D	G	F	N	Y	A	G	A	E	Y	R	F	N	R	E	R	T	Q	L	G	L	W	H	G	Q	L	E	D	V	Y	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	T	T														T	T		S	S		B				B	T	T		T	T	S			S												T	T	T	T											T	T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	R	G	K	T	R	H	T	G	L	E	T	Q	A	R	Y	D	L	G	T	L	T	P	T	L	D	N	V	S	I	Y	A	S	Y	A	Y	V	N	A	E	I	R	E	K	G	D	T	Y	G	N	L	V	P	F	S	P	K	H	K	G	T	L	G	V	D	Y	K	P	G	N	W	T	F	N	L	N	S	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	S	Y	A	N	L	L	H	K	Q	R	V	G	.	D	W	T	L	G	A	N	L	G	L	F	V	D	R	D	D	G	A	.	.	.	.	.	A	R	A	G	E	I	D	S	H	T	V	Y	G	L	F	S	A	G	I	G	L	H	T	F	Y	L	G	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.														T	.	T																T	T	.	.	.	.	.		T	T																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.	.
Template SS confidence
															207	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.						.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		688	.	690	.	.							.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.		.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure							.	.	.	.	.	.																																					.
Query SS confidence							.	.	.	.	.	.																																					.
Query Sequence		F	Q	S	S	Q	.	.	.	.	.	.	F	A	D	N	A	N	T	V	K	E	S	A	D	G	S	T	G	R	I	P	G	F	M	L	W	G	A	R	V	A	Y	D	F	G	P	Q	.	M	A	D	L	N	L	A	F	G	V	K	N	I	F	D	Q	D	Y	F	I	R	S	Y	D	D	N	N	K	G	I	Y	A
Query Conservation							.	.	.	.	.	.																																					.
Alig confidence							.	.	.	.	.	.																																					.									.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		K	V	G	G	D	S	G	W	Q	S	V	Y	G	S	S	G	R	S	M	G	N	D	M	F	N	G	N	F	T	N	A	D	E	R	S	W	Q	V	R	Y	D	Y	D	F	V	G	L	G	W	P	G	L	I	G	M	V	.	.	.	.	.	.	.	.	.	R	Y	G	H	G	S	N	A	T	T	K	A	G	S	G
Template Known Secondary structure						S	S					B	T	T			G	G	G	S	T	T		B	T	T	B				S	B	T												G	G	G	G	T		T	T						.	.	.	.	.	.	.	.	.									B		S	S		S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		761	.	.	.	.	.	.	.	.	770	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	P	R	T	L	Y	M	Q	G	S	L	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	E	W	E	R	D	V	E	L	G	Y	T	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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