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Job DescriptionP13036
Confidence5.95%DateThu Jan 5 11:33:31 GMT 2012
Rank73Aligned Residues222
% Identity11%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   528.530.........540.........550.........560.........570.........580... ......590.........600......
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Query Sequence  LNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDDGA. LTAEMGLFLINFNNQYDSNQTND
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Template Sequence  VGVDKKHELGLDLFTGFTVTHTDSSAS. . . . . . ADVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFA. .
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   1065....1070.........1080.........1090. ........1100.........1110.........1120.........1130......
 
   607..610.........620.........630.........640.........650.........660.........670........ .
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Query Sequence  TVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPG. . . . . . . N
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Template Sequence  . . TRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKSFSGKWK
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   1141........1150.........1160.........1170.........1180.........1190.........1200.........1210........
 
   680.........690.........700.........710.........720.........730.........740.........750.........
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Query Sequence  WTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIY
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Template Sequence  VTARAGLGYQFDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIR. DNVRFGLEFEKSAFGKYNVDN. . . . . . . . .
Template Known Secondary structure  T
TTB


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   1221........1230.........1240.........1250.........1260......... 1270.........1280.........1290
 
   760.........770....
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Query Sequence  AGQPRTLYMQGSLKF
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Template Sequence  . . . . . AVNANFRYSF
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   1291........1300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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