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Job DescriptionP13036
Confidence100.00%DateThu Jan 5 11:33:31 GMT 2012
Rank3Aligned Residues647
% Identity100%Templatec1po3A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:iron(iii) dicitrate transport protein feca PDBTitle: crystal structure of ferric citrate transporter feca in2 complex with ferric citrate
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  NDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPY
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Template Conservation   

 
 
 

 

  
 
         
 
   


 
    
 
       
 


          
 


        
Template Sequence  NDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPY
Template Known Secondary structure 

GGG
SSSGGGTGGGT

STTSTT


SBTTB
SSSS


TT


GGGTTSTT
SS
TT
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  GQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTA
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Template Conservation           
    

 


 


 

 

  
 





 

                                     
Template Sequence  GQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTA
Template Known Secondary structure  T



SS



GGG
S


SSS
SSGGG




SS
TTSS

S
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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  DNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPYDRFW
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Template Conservation                                                                                  
Template Sequence  DNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPYDRFW
Template Known Secondary structure  TTT

SSSS


SSSS






TT

S
SS
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   255....260.........270.........280.........290.........300.........310.........320.........330....
 
   368.370.........380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  GRRKLASLGYQFQPDSQHKFNIQGFYTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYLNES
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Template Conservation                                                                          
       
Template Sequence  GRRKLASLGYQFQPDSQHKFNIQGFYTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYLNES
Template Known Secondary structure 
SSSS

SS


TT
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   335....340.........350.........360.........370.........380.........390.........400.........410....
 
   448.450.........460.........470.........480.........490.........500.........510.........520.......
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Query Sequence  THEMRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQNNAITGTHEEVSYNAPLPA
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Template Conservation                                                                                  
Template Sequence  THEMRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQNNAITGTHEEVSYNAPLPA
Template Known Secondary structure 
TTSS



SSS
TTTTT

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   415....420.........430.........440.........450.........460.........470.........480.........490....
 
   528.530.........540.........550.........560.........570.........580.........590.........600.......
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Query Sequence  LNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDT
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Template Conservation                                       
          
              
       
        
Template Sequence  LNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDT
Template Known Secondary structure  TT


GGGSS


TTSS



SSS





TTTT
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   495....500.........510.........520.........530.........540.........550.........560.........570....
 
   608.610.........620.........630.........640.........650.........660.........670.........680.......
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Query Sequence  VTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTFNLNSD
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Template Conservation                                                    
  
   
         
            
Template Sequence  VTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTFNLNSD
Template Known Secondary structure 





TTSS
GGGTT
SSSTTTT
B
SS

SB
STT
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   575....580.........590.........600.........610.........620.........630.........640.........650....
 
   688.690.........700.........710.........720.........730.........740.........750.........760.......
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Query Sequence  FQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLY
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Template Conservation 
                         
   

   
          
 
 
 

 
  
                

   
Template Sequence  FQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLY
Template Known Secondary structure 

B
SSTT


S

SSSSSS
B

S
TTTT

STT




SSTT




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   655....660.........670.........680.........690.........700.........710.........720.........730....
 
   768.770....
Predicted Secondary structure 
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Query Sequence  MQGSLKF
Query Conservation 
   
 
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Template Conservation 
   
 
Template Sequence  MQGSLKF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   735....740.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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