 |
Job Description | P77808 | Confidence | 31.28% | Date | Thu Jan 5 12:33:01 GMT 2012 |
Rank | 181 | Aligned Residues | 102 |
% Identity | 13% | Template | d1cfza_ |
SCOP info | Phosphorylase/hydrolase-like
| HybD-like
| Hydrogenase maturating endopeptidase HybD
|
Resolution | 2.20 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
L | K | V | E | M | L | S | T | G | D | E | V | L | H | G | Q | I | V | D | T | N | A | A | W | L | A | D | F | F | F | H | Q | . |
. |
. |
. |
. |
G | L | P | L | S | R | R | N | T | V | G | D | N | L | D | D | L | V | T | I | L | R | E | R | S | Q | H | A | D | V | L | I | V | N | G | G | L | . |
G | P | T | S | D |
Query Conservation |   |
|   |   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
| . |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
| . | . | . |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |
|   |   |
Template Sequence |   |
M | R | I | L | V | L | G | V | G | N | I | L | L | T | . |
. |
. |
D | E | A | I | G | V | R | I | V | E | A | L | E | Q | R | Y | I | L | P | D | Y | V | E | I | L | D | G | G | T | A | G | M | E | L | L | G | D | M | . |
. |
. |
. |
. |
. |
. |
A | N | R | D | H | L | I | I | A | D | A | I | V | S | K | K | N | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  | S |
| T | T | B | G | . | . | . | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  | . | . | . | . | . | . | . | S | S |
| S |  |  |  |  |  |  |  |
|
| S | S |
| S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
  |   |
76 | |
|
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | . |
. |
. |
. |
. |
L | S | A | L | A | A | A | T | A | K | G | E | G | L | V | L | H | E | A | W | L | K | E | M | E | R | Y | F | H | E | R | G | R | V | M | A | P |
Query Conservation |   |
| . | . | . | . | . |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
P | G | T | M | M | I | L | R | D | E | E | V | P | A | L | F | T | N | K | I | S | P | H | Q | L | G | L | A | D | V | L | S | A | L | R | F | T | G | E | F | P | K | K |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|