Job Description P77808 Confidence 74.26% Date Thu Jan 5 12:33:01 GMT 2012 Rank 50 Aligned Residues 109 % Identity 14% Template c3k94A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamin pyrophosphokinase; PDBTitle: crystal structure of thiamin pyrophosphokinase from geobacillus2 thermodenitrificans, northeast structural genomics consortium target3 gtr2 Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	H	G	Q	I	V	D	T	N	A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	I	L	R	E	R	S	Q	H	A	D	V	L	I	V	N	G	G	L	G	P	T	S	D	D	L	S	A	L	A	A	A	T	A	K	G	E	G	L	V
Query Conservation
Alig confidence								.																															.																								.														.	.	.	.	.
Template Conservation								.																															.																								.														.	.	.	.	.
Template Sequence		V	R	A	F	G	D	.	F	D	S	L	P	A	E	D	V	V	K	L	Q	Q	A	F	P	D	L	D	V	W	P	A	E	K	D	K	T	D	.	X	E	I	A	L	D	W	A	V	E	Q	T	A	R	I	R	L	F	G	A	T	G	G	.	R	L	D	H	L	F	G	N	V	E	L	L	L	.	.	.	.	.
Template Known Secondary structure		S				S		.	G	G	G	S													T	T							B	T	T	B			.										T	T								S		S	S	S	.	S													.	.	.	.	.
Template Predicted Secondary structure								.																															.																								.														.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	H	E	A	W	L	K	E	M	E	R	Y	F	H	E	R	G	R	V	M	A	P	S	N	R	K	Q	A	E	L	P	A	S	A	E	F	I	.	N	N	P	V	G	T	A	C	G	F	A
Query Conservation																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	K	Y	A	D	R	P	I	E	I	V	D	R	Q	N	V	L	T	V	H	L	P	G	T	Y	T	V	X	Y	D	A	R	Y	C	Y	V	S	Y	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T	T	S							T	T								S									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions