 |
Job Description | P77808 | Confidence | 52.36% | Date | Thu Jan 5 12:33:01 GMT 2012 |
Rank | 96 | Aligned Residues | 90 |
% Identity | 9% | Template | c2y0dB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:udp-glucose dehydrogenase; |
PDBTitle: bcec mutation y10k
|
Resolution | 2.80 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | E | M | L | S | T | G | D | E | V | L | H | G | Q | I | V | D | T | N | A | A | W | L | A | D | F | F | F | H | Q | G | L | P | L | S | R | R | N | T | V | G | D | N | L | D | D | L | V | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | R | E | R | S | Q | H | A | D | V | L |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
T | F | A | I | W | G | L | A | F | K | P | N | T | D | D | M | R | E | A | P | S | R | E | L | I | A | E | L | L | S | R | G | A | R | I | A | A | Y | D | P | V | A | Q | E | E | A | R | R | V | I | A | L | D | L | A | D | H | P | S | W | L | E | R | L | S | F | V | D | D | E | A | Q | A | A | R | D | A | D | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | S | S | T | T |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  | T | T |  |  |  |
| S | S |  |  |  |  | T | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | N | G | G | L | G | P | T | S | D | D | L | S | A | L | A | A | A | T | A | K | G | E | G | L | V | L | H |
Query Conservation |   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
V | I | V | T | E | W | K | I | F | . |
K | S | P | D | F | V | A | L | G | R | L | W | K | T | P | V | I | F | D |
Template Known Secondary structure |   |
 |  |
| S |
|
| G | G | G | . | S | S |
|
|  |  |  |  |  | T | T |
| S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | |
. | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|