Job Description P77808 Confidence 37.78% Date Thu Jan 5 12:33:01 GMT 2012 Rank 152 Aligned Residues 78 % Identity 6% Template c2qvcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding PDBTitle: crystal structure of a periplasmic sugar abc transporter2 from thermotoga maritima Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	K	V	E	M	L	S	T	G	D	E	V	L	H	G	Q	I	V	D	T	N	A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	I	L	R	E	R	S	Q	H	.	A	D	V	L	I	V	N	G	G	L	G	P	T	S	D	D	L	S	A	L
Query Conservation																																																													.
Alig confidence												.	.	.	.																																														.
Template Conservation												.	.	.	.
Template Sequence		L	T	I	G	V	I	G	K	S	V	.	.	.	.	H	P	Y	W	S	Q	V	E	Q	G	V	K	A	A	G	K	A	L	G	V	D	T	K	F	F	V	P	Q	K	E	D	I	N	A	Q	L	Q	X	L	E	S	F	I	A	E	G	V	N	G	I	A	I	A	P	S	D	P	T	A	V	I	P	T	I	K	K
Template Known Secondary structure									S		S	.	.	.	.	S																		T									S	S																T	T		S							S	S	T	T	T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		81	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		108	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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