Job Description P77808 Confidence 26.98% Date Thu Jan 5 12:33:01 GMT 2012 Rank 220 Aligned Residues 74 % Identity 26% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		2	.	.	.	.	.	.	.	10																	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	V	E	M	L	S	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	L	H	G	Q	I	V	D	T	N	A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	I	L	R	E	R	S	Q	H	A	D	V	L	I
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		C	K	I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	.	.	.	.	.	.	.	N	V	S	A	N	S	K	L	V	I
Template Known Secondary structure										S												T	T	T	S		S							S															T	T	T	T		S								S	S	G	.	.	.	.	.	.	.	G	G	G	T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.
		66	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		V	N	G	G	L	G	.	.	.	.	P	T	S	D	D	L	S	A	L	A	A
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.
Template Conservation
Template Sequence		I	T	A	G	A	R	M	V	S	G	Q	T	R	L	D	L	L	Q	R	N	V
Template Known Secondary structure					S					T	T	T		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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