Job Description P77808 Confidence 54.30% Date Thu Jan 5 12:33:01 GMT 2012 Rank 93 Aligned Residues 82 % Identity 18% Template c2gk4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: the crystal structure of the dna/pantothenate metabolism flavoprotein2 from streptococcus pneumoniae Resolution 1.83 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	T	V	G	D	N	L	D	D	L	V	T	I	L	R	E	R	S	Q	H	A	D	V	L	I	V	N	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	I	I	T	E	T	L	L	S	A	G	Y	E	V	C	L	I	T	T	K	R	A	L	K	P	E	P	H	P	N	L	S	I	R	E	I	T	N	T	K	D	L	L	I	E	X	Q	E	R	V	Q	D	Y	Q	V	L	I	H	S	X	A	V	S	D	Y	T	P	V	Y	X	T	G	L	E	E	V	Q	A	S
Template Known Secondary structure												T	T									T	T	S							T	T								S												G	G	G		S						S	B			S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
									71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	P	T	S	D	D	L	S	A	L	A	A	A	T	A	K	G	E	G	L	V	L	H	E	A	W	L	K	E	M	E	R	Y	F
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	L	K	E	F	L	S	K	Q	N	H	Q	A	K	I	S	S	T	D	E	V	Q	V	L	F	L	K	K	T	P	K	I	I	S	L	V	K	E	W	N
Template Known Secondary structure		S		G	G	G	G	G	G			G	G	G					T	T		S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions