Job Description P77808 Confidence 99.94% Date Thu Jan 5 12:33:01 GMT 2012 Rank 16 Aligned Residues 143 % Identity 30% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		L	K	V	E	M	L	S	T	G	D	E	V	L	H	.	.	.	.	.	.	.	G	Q	I	V	D	T	N	A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	I	L	R	E	R	S	Q	H	A	D	V	L	I	V	N	G	G	L	G	P	T	S
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R	A	D	V	I	I	T	S	G	G	V	S	M	G	E
Template Known Secondary structure											T	T				T	T	S				T	T																	T	T											S																	S						S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		D	D	L	S	A	L	A	A	A	T	A	K	G	E	G	L	V	L	H	E	A	W	L	K	E	M	E	R	Y	F	H	E	R	G	R	V	M	A	P	S	N	R	K	Q	A	E	L	P	A	S	A	E	F	I	N	N	P	V	G	T	A	C	G	F	A	V	Q	L	N	.	.	.	.	R	C	L	M	F	F	T
Query Conservation																																																																							.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	Y	L	K	Q	V	L	D	I	D	L	H	A	Q	I	H	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	F	M	K	P	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	T	F	A	T	L	D	I	D	G	V	R	K	I	I	F	A	L
Template Known Secondary structure		T										T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		B	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.															.	.	600	.	.	.	.	.																					.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	V	P	S	E	F	K	V	M	V	E	H	E	I	L	P	R	L	R	E	R	F	S	L	P	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	N	P	V	S	A	V	V	T	C	N	L	F	V	V	P	A	L	R	K	M	Q	G	I	L	D	P
Template Known Secondary structure			S	S																				T	T		S
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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