Job Description P77808 Confidence 80.45% Date Thu Jan 5 12:33:01 GMT 2012 Rank 42 Aligned Residues 70 % Identity 20% Template c2f1kD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		L	K	V	E	M	L	S	T	G	D	E	V	L	H	G	Q	I	V	D	T	N	A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	I	L	.	.	.	.	.	.	.	.	R	E	R	S	Q	H	A	D	V	L	I	V	N	G	G	L	G	P	T
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template Sequence		M	K	I	G	V	V	G	L	G	L	I	.	.	.	.	.	.	.	.	.	.	G	A	S	L	A	G	D	L	R	R	R	G	H	Y	L	I	G	V	S	R	Q	Q	S	T	C	E	K	A	V	E	R	Q	L	V	D	E	A	G	Q	D	L	S	L	L	Q	T	A	K	I	I	F	L	C	.	.	.	.	.	T
Template Known Secondary structure										S			.	.	.	.	.	.	.	.	.	.											T	T								S											T	T	S		S				S		G	G	G	G	T	T		S						.	.	.	.	.	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.											.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.
		74	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	D	L	S	A	L	A	A	A	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	Q	L	I	L	P	T	L	E	K	L	I
Template Known Secondary structure			G	G	G									G
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions