Job Description P77808 Confidence 24.86% Date Thu Jan 5 12:33:01 GMT 2012 Rank 235 Aligned Residues 113 % Identity 15% Template c1pjcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.															.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	E	R	S	Q	H	A	D	V	L	I	V	N	G	G	L	G	P	.	.	T	S	D	D	L	S	A	L	A	A	A	T	A	K
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.													.	.
Template Conservation																																																																																.	.
Template Sequence		G	T	E	A	A	K	M	A	V	G	L	G	A	Q	V	Q	I	F	D	I	N	V	E	R	L	S	Y	L	E	T	L	F	G	S	R	V	E	L	L	Y	S	N	S	A	E	I	E	T	A	V	A	E	A	D	L	L	I	G	A	V	L	V	P	G	R	R	A	P	I	L	V	P	A	S	L	V	E	Q	.	.
Template Known Secondary structure												T	T								S													G	G	G	S																T		S									T	T	S	S					B						T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.												.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		G	E	G	L	V	L	H	E	A	W	L	K	E	M	E	R	Y	F	H	E	R	G	R	V	M	A	P	S	N	R	K	Q	A	E	L	P	A	S	A	E	F	I	N	N	P	V	G	T	A	C	G	F	.	.	.	.	.	.	.	.	.	.	.	A	V	Q	L	N	R	C	L	M	F	F	T	P	G	V	P	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	T	G	S	V	I	V	D	V	A	V	D	Q	G	G	C	V	E	T	L	H	P	T	S	H	T	Q	P	T	Y	E	V	F	G	V	V	H	Y	G	V	P	N	M	P	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T						T	T		T	T			S	B	T	T						S	S	S						T	T							S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
					155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	E	F	K	V	M	V	E	H	E	I	L	P	R	L	R	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	V	P	W	T	A	T	Q	A	L	N	N	S	T	L	P	Y	V	V	K
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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