Job Description P77808 Confidence 68.74% Date Thu Jan 5 12:33:01 GMT 2012 Rank 57 Aligned Residues 119 % Identity 13% Template c1l7eC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh Resolution 1.90 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		A	A	W	L	A	D	F	F	F	H	Q	G	L	P	L	S	R	R	N	T	V	G	D	N	L	D	D	L	V	T	.	.	.	.	.	.	.	.	.	.	I	L	R	E	R	S	Q	H	A	D	V	L	I	V	N	G	G	L	.	.	G	P	T	S	D	D	L	S	A	L	A	A	A	T	A	K	G	E	G	L
Query Conservation																																.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.																			.	.															.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		G	L	Q	A	I	A	T	A	K	R	L	G	A	V	V	M	A	T	D	V	R	A	A	T	K	E	Q	V	E	S	L	G	G	K	F	I	K	Q	A	E	A	V	L	K	E	L	V	K	T	D	I	A	I	T	T	A	L	I	P	G	K	P	A	P	V	L	I	T	E	E	M	V	T	K	.	.	.	.	.	.
Template Known Secondary structure												T	T								S	S	T	T	S					T	T	T	T															T	T		S									T	T	S						S							T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		984	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.
Predicted Secondary structure																																											.	.				.	.	.	.	.																								.	.	.	.
Query SS confidence																																											.	.				.	.	.	.	.																								.	.	.	.
Query Sequence		V	L	H	E	A	W	L	K	E	M	E	R	Y	F	H	E	R	G	R	V	M	A	P	S	N	R	K	Q	A	E	L	P	A	S	A	E	F	I	N	N	P	.	.	V	G	T	.	.	.	.	.	A	C	G	F	A	V	Q	L	N	R	C	L	M	F	F	T	P	G	V	P	S	E	F	.	.	.	.	K	V
Query Conservation																																											.	.				.	.	.	.	.																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.				.	.	.	.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	P	G	S	V	I	I	D	L	A	V	E	A	G	G	N	C	P	L	S	E	P	G	K	I	V	V	K	H	G	V	K	I	V	G	H	T	N	V	P	S	R	V	A	A	D	A	S	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T						T	T	G	G	G	T		S	S	T	T			T	T						T	T							S		G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	H	E	I	L	P	R	L	R	E	R	F	S	L	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	A	K	N	L	L	N	F	L	T	P	H	V	D	K	D	T
Template Known Secondary structure												G	G	G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		1134	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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