Job Description P05020 Confidence 99.65% Date Thu Jan 5 10:58:35 GMT 2012 Rank 55 Aligned Residues 282 % Identity 12% Template c2ogjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of a dihydroorotase Resolution 2.62 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																																										.	.
Query SS confidence																				.	.	.																																																										.	.
Query Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	L	H	L	R	D	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	P	P	V	T	T	V	E	A	A	V	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	.	.
Query Conservation																				.	.	.																																																										.	.
Alig confidence																				.	.	.																																.	.	.	.	.																						.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		D	A	A	F	I	S	P	G	W	V	D	L	H	V	H	I	W	H	G	G	T	D	I	S	I	R	P	S	E	C	G	A	E	R	G	V	T	T	L	V	D	A	G	S	A	G	E	A	N	F	H	G	.	.	.	.	.	F	R	E	Y	I	I	E	P	S	R	E	R	I	K	A	F	L	N	L	G	S	I	G
Template Known Secondary structure																			T	T	T	S	S	S				G	G	G	S	S	G	G	G	T												G	G	G	S	T	T	.	.	.	.	.					T	T	T	T		S	S								S	S	T	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Y	L	T	D	S	L	D	P	N	E	L	E	R	G	F	N	E	G	V	F	T	A	A	K	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	I	D	A	I	M	P	V	L	E	R	M	E	K	I	G	M	P	L	L	V	H	G	E	V	T	H	A	D	I	D
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																				.	.	.																															.	.
Template Conservation																																															.	.	.																															.	.
Template Sequence		L	V	A	C	N	R	V	P	E	L	R	D	I	K	D	I	D	L	D	R	I	L	E	C	Y	A	E	N	S	E	H	I	V	G	L	V	R	A	S	H	V	I	T	G	S	.	.	.	W	G	V	T	P	V	K	L	G	K	K	I	A	K	I	L	K	V	P	X	X	V	H	V	G	E	P	P	A	L	.	.
Template Known Secondary structure		T	T	T	T	T	T	S		S		S	S	G	G	G												T	T	T	T	T								S					T	T	.	.	.			S														T									S	T	T	S		.	.
Template Predicted Secondary structure																																															.	.	.																															.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	D	R	E	A	R	F	I	E	S	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	.	.	.	.	.	.	.	.	.	T	K	D	A	A	D	Y	V	R	D	G	N	E	R	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	H	M	L	V	G	G	V	R	P	H	L
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	E	V	L	E	I	L	G	P	G	D	V	V	T	H	C	F	N	G	K	S	G	S	S	I	X	E	D	E	D	L	F	N	L	A	E	R	C	E	G	I	R	L	D	I	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										T	T					S	T	B				T	T	T		S	S	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	N	R	V	F	L	G	T	D	S	A	P	H	A	R	H	R	K	E	S	S	C	G	C	A	G	C	F	N	A	P	T	A	L	G	S	Y	A	T	V	F	E	E	M	N	A	L	Q	H	F	E	A	F	C	S	V	N	G
Query Conservation
Alig confidence		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	G	G	A	S	F	S	F	K	V	A	E	A	A	I	A	R	G	L	L	P	F	S	I	S	T	D	L	H	G	H	S	X	N	F	P	V	.	.	.	.	.	.	.	.	.	.	.	W	D	L	A	T	T	X	S	K	L	L	S	V	D	X	P	F	E	N	V	V	E	A	V	T	R	N	P
Template Known Secondary structure		.	.	.	.	.	S	S	S	S	B											T	T				S						B	S					T	T	T		.	.	.	.	.	.	.	.	.	.	.													T	T									T	T	T
Template Predicted Secondary structure		.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.												.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		301	.	.	.	.	.										.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.									330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		P	Q	F	Y	G	L	.	.	.	.	.	.	.	.	.	P	V	N	D	T	F	I	E	L	V	R	E	E	Q	Q	V	A	E	S	I	A	L	T	.	.	.	.	.	.	.	.	D	D	T	L	V	P	F	L	A	G	E	T	V	R	W	S
Query Conservation								.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.						.
Template Conservation																																																					.
Template Sequence		A	S	V	I	R	L	D	X	E	N	R	L	D	V	G	Q	R	A	D	F	T	V	F	D	L	V	D	A	D	L	E	A	T	D	S	N	G	D	V	S	R	L	K	R	L	F	E	P	R	Y	A	.	V	I	G	A	E	A	I	A	A	S
Template Known Secondary structure					T	T				T	T	T	T	S	T	T	S	B																		T	T	S															.			T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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