55 c2ogjB_ Probab=99.65   E-value=1e-15  Score=113.73  Aligned_columns=282  Identities=12%

Q ss_pred             CCCEEECCCCCEEECCCC---CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEE--
Q ss_conf             770782335300504774---335889898860697089985882168989899999999998407872457737899--
Q batch____         5 SQVLKIRRPDDWHLHLRD---GDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTC--   79 (348)
Q Consensus         5 ~~~l~lPg~iD~HvH~Re---ed~~tgt~aAaaGGvTtv~~MPNt~Ppi~t~e~~~~~~~~~~~~~~~~~~~~~~~~~--   79 (348)
                      ++.+++||+||+|+|+..   .........++.+|+|++++++++.+.....     ..+.+.+............+.  
T Consensus        44 ~G~~v~PGfID~H~Hl~~~~~~~~~~~~~~~~~~Gvt~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  118 (368)
T c2ogjB_          44 DAAFISPGWVDLHVHIWHGGTDISIRPSECGAERGVTTLVDAGSAGEANFHG-----FREYIIEPSRERIKAFLNLGSIG  118 (368)
T ss_dssp             CCCEEEECEEEEEECCCTTTSSSCCCGGGSSGGGTEEEEEEEEEEEGGGSTT-----HHHHTTTTCSSEEEEEEESSTTT
T ss_pred             ECCEECCCEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHH-----HHHHHHHHCCCCCCEEEEECCCC
T ss_conf             3798616708150168787775567877888743957998514787256899-----99999963113751797522565


Q ss_pred             ----------EECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf             ----------9668888788885573477104764144222468877579999999999999749869994168521028
Q batch____        80 ----------YLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADID  149 (348)
Q Consensus        80 ----------~~~~~~~~~~i~~~~~~~~~~~~K~f~~~~~~~s~~gv~d~~~l~~~l~~~~~~g~~v~vHaEd~~~~~~  149 (348)
                                ........+.+.+......-...-...........   ...+.+.++++.+++.|.++.+|+-.....  
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~a~~~~~~~~~h~~~~~~~--  193 (368)
T c2ogjB_         119 LVACNRVPELRDIKDIDLDRILECYAENSEHIVGLVRASHVITGS---WGVTPVKLGKKIAKILKVPXXVHVGEPPAL--  193 (368)
T ss_dssp             TTTTTTSCSCSSGGGCCHHHHHHHHHTTTTTEEECCEESHHHHTT---CCSHHHHHHHHHHHHHTCCCEEEECSTTSC--
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCC---CCHHHHHHHHHHHHHHCCCCCEEECCCHHH--
T ss_conf             313676432224321488999999974541004799841665433---899999999999998189831262388778--


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCEEEEECC---------CHHHHHHHHHCCCCEEEEEEHHHHEECHHHHCCCCCCCCE
Q ss_conf             0246899999999999854289829999259---------9999999996799569997325630068885167898516
Q batch____       150 IFDREARFIESVMEPLRQRLTALKVVFEHIT---------TKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHL  220 (348)
Q Consensus       150 ~~~~E~~~~~~~~~~~~~~~~~~~i~i~HiS---------t~~sie~ik~~g~~Vt~EvtpHhL~l~~~d~~~~~~~~~~  220 (348)
                                   ........+...++.|..         ..............+.+.+++                   
T Consensus       194 -------------~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  241 (368)
T c2ogjB_         194 -------------YDEVLEILGPGDVVTHCFNGKSGSSIXEDEDLFNLAERCEGIRLDIGH-------------------  241 (368)
T ss_dssp             -------------HHHHHHHCCTTCEEESTBCCCTTTCSSSCHHHHHHHHHCCCCEEEEEE-------------------
T ss_pred             -------------HHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCHHHHCCCCEEEEECCC-------------------
T ss_conf             -------------999999851895899963058111101333210211036827865478-------------------


Q ss_pred             EEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCH
Q ss_conf             98389989999999999986299639980287778966716656888836889999999999731899999999970053
Q batch____       221 YCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNG  300 (348)
Q Consensus       221 k~~PPlR~~~dr~aL~~~l~~G~id~~IaTDHAPh~~eeK~~~~~~~Gi~g~e~~lpll~~~~~~~~~l~~~v~~~s~NP  300 (348)
                           .+.......++..+.+|.+.+.++||+.|+......           ....-.+......++++++++++++.||
T Consensus       242 -----~~~~~~~~~~~~~l~~~~~~~~lgtD~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~eal~~~T~n~  305 (368)
T c2ogjB_         242 -----GGASFSFKVAEAAIARGLLPFSISTDLHGHSXNFPV-----------WDLATTXSKLLSVDXPFENVVEAVTRNP  305 (368)
T ss_dssp             -----SSSSBCHHHHHHHHHTTCCCSEEEECBSHHHHTTTC-----------CCHHHHHHHHHHTTCCHHHHHHTTTHHH
T ss_pred             -----CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHH-----------HHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             -----765589899999998289749999478887652001-----------3577888888724989999999980768


Q ss_pred             HHHCCC---------CCCCEEEEECCCCEEECHHHHCC--------CCCCCCCCCCEEECCE
Q ss_conf             786188---------75780799878866847556056--------7754205588480224
Q batch____       301 PQFYGL---------PVNDTFIELVREEQQVAESIALT--------DDTLVPFLAGETVRWS  345 (348)
Q Consensus       301 Aki~gl---------~~~d~~i~d~~~~~~v~~~~~~s--------k~~~sPf~~g~~l~~~  345 (348)
                      ||+|||         +.||++|+|.++.-.........        +.+++ +.+|+..-|.
T Consensus       306 A~~lgl~~~G~I~~G~~ADlvI~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-iv~G~~v~~~  366 (368)
T c2ogjB_         306 ASVIRLDXENRLDVGQRADFTVFDLVDADLEATDSNGDVSRLKRLFEPRYA-VIGAEAIAAS  366 (368)
T ss_dssp             HHHTTCCCTTTTSTTSBCEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEE-EETTEEEECC
T ss_pred             HHHCCCCCCCEECCCCCCCEEEEECCCCCEEEEECCCCEEECCCCCCEEEE-EECCEEEEEE
T ss_conf             998078772032578706689996787752344067853403445622799-9999899852