Return to main results Retrieve Phyre Job Id

Job DescriptionP27836
Confidence20.79%DateThu Jan 5 11:44:13 GMT 2012
Rank235Aligned Residues104
% Identity17%Templated2cvoa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150........ .160.........170...
Predicted Secondary structure 














.............







Query SS confidence 



















































. . . . . . . . . . . . .














Query Sequence  EGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHA. . . . . . . . . . . . . SGAQIVTVAMGSPKQ
Query Conservation      




    
       
       


   

    
   

  
  .............  



 



 


Alig confidence 



















































.............














Template Conservation     











 





  

  

  
 
   

  
    
 
                    
 



   
Template Sequence  EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCLPHGTT
Template Known Secondary structure  S
S
SSTT
SS
STTTTS

GGGTTS




B
GGG

GGG
S


SS
Template Predicted Secondary structure 





































Template SS confidence 















































































   71........80.........90.........100.........110.........120.........130.........140.........150
 
   174.....180.........190.........200 .........210...
Predicted Secondary structure 





........







Query SS confidence 


























. . . . . . . .












Query Sequence  EIIMRDCRLVHPDALYMGVGGTYDVFT. . . . . . . . GHVKRAPKIWQTL
Query Conservation 
         
   
 
 





  
........
   


 
    
Alig confidence 



...



















........












Template Conservation      ...  
  
  




 



     
   
   
  
 
    
Template Sequence  QEII. . . KGLPQELKIVDLSADFRLRDINEYAEWYGHSHRAPELQQEA
Template Known Secondary structure  ...TS
SS

SSTTT
S
SS

S
TT
Template Predicted Secondary structure  ...


















Template SS confidence 















































   152... ....160.........170.........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions