 |
Job Description | P27836 | Confidence | 32.16% | Date | Thu Jan 5 11:44:13 GMT 2012 |
Rank | 158 | Aligned Residues | 97 |
% Identity | 9% | Template | d1ve1a1 |
SCOP info | Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
|
Resolution | 1.45 |
|
 |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
G | I | S | V | V | R | S | V | R | K | K | Y | P | Q | A | Q | V | S | R | V | A | G | A | D | L | W | E | E | L | M | A | R | A | G | K | E | G | T | P | V | F | L | V | G | G | K | . |
. |
P | E | V | L | A | Q | T | E | A | K | L | R | N | Q | W | N | V | N | I | V | G | S | Q | D | G | Y | F | K | P | E | Q | . |
Query Conservation |   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |   |   |   |
| . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|   |
|
|
|   |   |
|   |   |   | . |
|
|   |   |   | . |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | I | G | L | A | M | I | A | A | S | R | . |
G | Y | R | L | I | . |
L | T | M | P | A | Q | M | S | E | E | R | K | R | V | L | K | A | F | G | A | E | L | V | L | T | D | P | E | R | R | M | L | A | A | R | E | E | A | L | R | L | K | E | E | L | G | A | F | M | P | D | Q | F | K | N | P | A | N | V | R | A | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | T |
|  |  |  | . |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| B |
|
|
| T | T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | |
|
|
160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | A | L | F | E | R | I | H | A | S | . |
. |
. |
G | A | Q | I | V | T | V | A | M | G | S |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   | . | . | . |   |
|
|
|
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
Y | E | T | T | G | P | E | L | Y | E | A | L | E | G | R | I | D | A | F | V | Y | G | S | G | T |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  |  |  | T | T | T |
|
| S |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|