Job Description P27836 Confidence 86.66% Date Thu Jan 5 11:44:13 GMT 2012 Rank 11 Aligned Residues 177 % Identity 12% Template d1usga_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.53

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L	I	G	W	R	D	M	Q	H	A	L	D	Y	L	F	A	D	G	Q	L	K	Q	G	T	L	V	A	I	N	A	E	K	M	L	T	I	E	D	N	A	E	V	R	E	L	I	N	A	A	E	F	K	Y	A	D	G	I	S	V	V	R	S	V	R	K	K	Y	P	Q	A	Q	V	S	R	V	A	G	A
Query Conservation
Alig confidence																																						.	.	.	.	.																												.
Template Conservation																																						.	.	.	.	.																												.
Template Sequence		V	E	Y	D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	I	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	.	.	.	.	.	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	S	P	G	A	T	N	P	E	L	T	Q	R	.	G	Y	Q	H	I	M	R	T	A	G	L
Template Known Secondary structure							T	T															T	T								S	S					.	.	.	.	.											T											G	G	G	G	S	S	.			S	S					S
Template Predicted Secondary structure																																						.	.	.	.	.																												.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120
		95			.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure			.	.														.	.																							.	.	.
Query SS confidence			.	.														.	.																							.	.	.
Query Sequence		D	.	.	L	W	E	E	L	M	A	R	A	G	K	E	G	.	.	T	P	V	F	L	V	G	G	K	P	E	V	L	A	Q	T	E	A	K	L	R	N	.	.	.	Q	W	N	V	N	I	V	G	S	Q	D	G	Y	F	K	P	E	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A	Q	I	V	T	V	A
Query Conservation			.	.														.	.																							.	.	.
Alig confidence			.	.														.	.																							.	.	.
Template Conservation
Template Sequence		D	S	S	Q	G	P	T	A	A	K	Y	I	L	E	T	V	K	P	Q	R	I	A	I	I	H	D	K	Q	Q	Y	G	E	G	L	A	R	S	V	Q	D	G	L	K	A	A	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	D	F	S	A	L	I	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G
Template Known Secondary structure		G	G	G												T	T			S	S							S	S																	T	T											T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	S	P	K	Q	E	I	I	M	R	D	C	R	L	V	H	P	D	A	L	Y	M	G	V	G	G	T	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Y	P	E	M	G	Q	M	L	R	Q	A	R	S	V	G	L	K	T	Q	F	M	G	P	E	G	V	G	N
Template Known Secondary structure		S															T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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