Job Description P27836 Confidence 79.62% Date Thu Jan 5 11:44:13 GMT 2012 Rank 19 Aligned Residues 106 % Identity 14% Template d1qo0a_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.25

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																				.																						.	.	.															.	.
Query SS confidence																				.																						.	.	.															.	.
Query Sequence		A	G	A	D	L	W	E	E	L	M	A	R	A	G	K	E	G	T	.	P	V	F	L	V	G	G	K	P	E	V	L	A	Q	T	E	A	K	L	R	N	.	.	.	Q	W	N	V	N	I	V	G	S	Q	D	G	Y	F	.	.	K	P	E	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A	Q	I	V	T
Query Conservation																				.																						.	.	.															.	.
Alig confidence																				.																						.	.	.															.	.
Template Conservation
Template Sequence		A	P	N	Q	N	S	A	P	L	A	A	Y	L	I	R	H	Y	G	E	R	V	V	F	I	G	S	D	Y	I	Y	P	R	E	S	N	H	V	M	R	H	L	Y	R	Q	H	G	G	T	V	L	E	E	I	Y	I	P	L	Y	P	S	D	D	D	L	Q	R	A	V	E	R	I	Y	Q	A	R	A	D	V	V	F
Template Known Secondary structure			G	G	G	T												S		S								S	S																T	T	T											S	S																	T		S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	A	M	G	S	P	K	Q	E	I	I	M	R	D	C	R	L	V	.	H	P	D	A	L	Y	M	G	V	G	G	T	Y	D
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		S	T	V	V	G	T	G	T	A	E	L	Y	R	A	I	A	R	R	Y	G	D	G	R	R	P	P	I	A	S	L	T	T	S
Template Known Secondary structure						S	T	T														S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions