Job Description P27836 Confidence 64.32% Date Thu Jan 5 11:44:13 GMT 2012 Rank 51 Aligned Residues 110 % Identity 11% Template c3sajB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 1; PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain Resolution 2.50 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		E	E	L	M	A	R	A	G	K	E	G	T	P	V	F	L	V	G	G	K	P	E	V	L	A	Q	T	E	A	K	L	R	N	.	.	.	Q	W	N	V	N	I	V	G	S	Q	D	G	Y	F	K	P	E	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A	Q	I	V	T	V	A	M	G	S	P	K	Q	E
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		E	A	L	I	S	I	I	D	H	Y	K	W	Q	T	F	V	Y	I	Y	D	A	D	R	G	L	S	V	L	Q	R	V	L	D	T	A	A	E	K	N	W	Q	V	T	A	V	N	I	L	T	T	T	E	E	G	Y	R	M	L	F	Q	D	L	E	K	K	K	E	R	L	V	V	V	D	C	E	S	E	R	L	N
Template Known Secondary structure												T														T	T													T								T	T	T																S	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		175	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		I	I	M	R	D	C	R	L	V	.	H	P	D	A	L	Y	M	G	V	G	G	T	Y	D	V	F	T	G	H	V	K	R	A	P
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		A	I	L	G	Q	I	V	K	L	E	K	N	G	I	G	Y	H	Y	I	L	A	N	L	G	F	M	D	I	D	L	N	K	F	K
Template Known Secondary structure										T	T		S	S	T	T								S	B	T	T	S	S			S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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