Job Description P27836 Confidence 51.30% Date Thu Jan 5 11:44:13 GMT 2012 Rank 83 Aligned Residues 140 % Identity 12% Template c3s99A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:basic membrane lipoprotein; PDBTitle: crystal structure of a basic membrane lipoprotein from brucella2 melitensis, iodide soak Resolution 2.05 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	I	G	W	R	D	M	Q	H	A	L	D	Y	L	F	A	D	G	Q	L	K	Q	G	T	L	V	A	I	N	A	E	K	M	L	T	I	E	D	N	A	E	V	R	E	L	I	N	A	A	E	F	K	Y	A	D	G	I	S	V	V	R	S	V	R	K	K	Y	P	Q	A	Q	V	S	R	V	A	G	A	D	.
Query Conservation																																																																																	.
Alig confidence																																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	N	V	A	E	G	A	D	A	E	R	S	I	K	R	I	A	R	A	G	N	K	L	I	F	T	T	S	F	G	Y	M	D	P	T	V	K	.	.	.	V	A	K	K	F	P	D	V	K	F	E	H	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	T	A	D	N	M	S	A	Y	N	A
Template Known Secondary structure				S			T	T													T	T		S						S	G	G	G							.	.	.			T	T		T	T	S						S		.	.	.	.	.	.	.	.	.	.	.	.				B	T	T
Template Predicted Secondary structure																																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.													.	.	.	.	.	.	.	120	.	.	.	.
								96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.	.																.												.
Query SS confidence		.	.	.	.	.	.																								.	.	.	.	.																.												.
Query Sequence		.	.	.	.	.	.	L	W	E	E	L	M	A	R	A	G	K	E	G	T	P	V	F	L	V	G	G	K	P	.	.	.	.	.	E	V	L	A	Q	T	E	A	K	L	R	N	Q	W	N	.	V	N	I	V	G	S	Q	D	G	Y	F	.	K	P	E	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A	Q
Query Conservation		.	.	.	.	.	.																								.	.	.	.	.																.												.
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.																.												.
Template Conservation
Template Sequence		R	F	Y	E	G	R	Y	V	Q	G	V	I	A	A	K	M	S	K	K	G	I	A	G	Y	I	G	S	V	P	V	P	E	V	V	Q	G	I	N	S	F	M	L	G	A	Q	S	V	N	P	D	F	R	V	K	V	I	W	V	N	S	W	F	D	P	G	K	E	A	D	A	A	K	A	L	I	D	Q	G	V	D
Template Known Secondary structure																			S	S																											T	T		T	T									S	S	S																T	T		S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		163	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	V	A	M	G	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	Q	H	T	D	S	T
Template Known Secondary structure						S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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