Return to main results Retrieve Phyre Job Id

Job DescriptionP27836
Confidence28.43%DateThu Jan 5 11:44:13 GMT 2012
Rank176Aligned Residues126
% Identity10%Templatec3no5C_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pfam duf849 domain containing protein2 (reut_a1631) from ralstonia eutropha jmp134 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130 .........140.... .....150.........160...
Predicted Secondary structure 








...







....




Query SS confidence 







































. . .













. . . .


















Query Sequence  VAGADLWEELMARAGKEGTPVFLVGGKPEVLAQTEAKLRN. . . QWNVNIVGSQDGYF. . . . KPEQRQALFERIHASGAQI
Query Conservation 
 
 

   

         




    
       
  ...     


   

 ....   
   

  
    


Alig confidence 







































...













....


















Template Conservation   
               

 

    
         
   
 
  
     
 
   
 
     
   
  
       
Template Sequence  DNPPELVDWLAAEXKTYGIKPEVEAFDLSXIFQAAAXQAAGAIVGPLHIQFVXGIKNAXPVDREVLEFYVQTLKRLSPDA
Template Known Secondary structure 


TT
SSTTSS
SS


TTS




TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   120.........130.........140.........150.........160.........170.........180.........190.........
 
   164.....170.........180.........190.........200.. .......210......
Predicted Secondary structure 











........







Query SS confidence 






































. . . . . . . .













Query Sequence  VTVAMGSPKQEIIMRDCRLVHPDALYMGVGGTYDVFTGH. . . . . . . . VKRAPKIWQTLGLE
Query Conservation 
 



 



         
   
 
 





  

 ........  


 
    


Alig confidence 






































........













Template Conservation   
 
 
 
         
  










 
    
  
  




     

   

 
Template Sequence  TWTGAGIGRHQLTXARWSLELGGHCRTGLEDNVRLDKNTLAPSNAALVRQVAELCEEYGRP
Template Known Secondary structure 
STTT
STTT
SBSSSS
B
S
TT

Template Predicted Secondary structure 
























Template SS confidence 




























































   200.........210.........220.........230.........240.........250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions