Job Description P27836 Confidence 72.07% Date Thu Jan 5 11:44:13 GMT 2012 Rank 33 Aligned Residues 108 % Identity 14% Template c3eafA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter, substrate binding protein; PDBTitle: crystal structure of abc transporter, substrate binding protein2 aeropyrum pernix Resolution 2.00 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																				.				.	.																							.	.	.																.	.
Query SS confidence																				.				.	.																							.	.	.																.	.
Query Sequence		R	V	A	G	A	D	L	W	E	E	L	M	A	R	A	G	K	E	.	G	T	P	.	.	V	F	L	V	G	G	K	P	E	V	L	A	Q	T	E	A	K	L	R	N	Q	W	.	.	.	N	V	N	I	V	G	S	Q	D	G	Y	F	K	P	E	.	.	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A
Query Conservation																				.				.	.																							.	.	.																.	.
Alig confidence																				.				.	.																							.	.	.																.	.
Template Conservation
Template Sequence		A	P	D	Y	S	T	Q	A	C	S	G	L	A	F	L	A	S	E	F	G	Q	G	K	L	A	L	A	Y	D	S	K	V	A	Y	S	R	S	P	I	G	A	I	K	K	A	A	P	S	L	G	L	Q	V	V	G	D	Y	D	L	P	L	R	A	T	E	A	D	A	E	R	I	A	R	E	X	L	A	A	D	P
Template Known Secondary structure		S																				S									T	T						T	T								T	G	G	G	T											T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	T	V	A	M	G	S	P	K	Q	E	I	I	M	R	D	C	R	L	V	H	P	D	A	L	Y	M	G	V	G	G	T	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	V	W	C	G	N	T	I	S	S	C	S	L	L	G	R	A	X	A	K	V	G	L	D	A	F	L	L	T	N	V	W	G	F	D
Template Known Secondary structure		S						S																T									G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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