Job Description P27836 Confidence 67.54% Date Thu Jan 5 11:44:13 GMT 2012 Rank 43 Aligned Residues 140 % Identity 10% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	W	R	D	M	Q	H	A	L	D	Y	L	F	A	D	G	Q	L	K	Q	G	T	L	V	A	I	N	A	E	K	M	L	T	I	E	D	N	A	E	V	R	E	L	I	N	A	A	E	F	K	Y	A	D	G	I	S	V	V	R	S	V	R	K	K	Y	P	Q	A	Q	V	S	R	V	A	G	A	D	L
Query Conservation
Alig confidence																				.																	.	.	.	.	.
Template Conservation																				.																	.	.	.	.	.
Template Sequence		I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	.	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	.	.	.	.	.	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	K	V	T	R	F	D	T
Template Known Secondary structure				S																.	T																.	.	.	.	.						T	T	T		S														T	T		S	S
Template Predicted Secondary structure																				.																	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	E	L	M	A	R	A	G	K	E	G	T	P	V	F	L	V	G	G	K	P	E	V	L	A	Q	T	E	A	K	L	R	N	Q	W	N	V	N	I	V	G	S	Q	D	G	Y	F	K	P	E	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A	Q	I	V	T	V	A
Query Conservation
Alig confidence						.																						.	.																	.	.
Template Conservation						.																						.	.																	.	.
Template Sequence		M	R	A	V	.	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	.	.	K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	.	.	F	S	S	E	D	E	I	T	T	L	I	S	K	V	K	T	E	N	I	K	I	V	V	S	G
Template Known Secondary structure						.				G	G	G		S								S	S		S	S		.	.									T								.	.			S	G	G	G											T	T
Template Predicted Secondary structure						.																						.	.																	.	.
Template SS confidence
		82	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions