Job Description P27836 Confidence 62.31% Date Thu Jan 5 11:44:13 GMT 2012 Rank 54 Aligned Residues 104 % Identity 18% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		56	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.	.																											.
Query SS confidence											.	.																											.
Query Sequence		A	E	V	R	E	L	I	N	A	.	.	A	E	F	K	Y	A	D	G	I	S	V	V	R	S	V	R	K	K	Y	P	Q	A	Q	V	S	R	.	V	A	G	A	D	L	W	E	E	L	M	A	R	A	G	K	E	G	T	P	V	F	L	V	G	G	K	P	E	V	L	A	Q	T	E	A	K	L	R	N	Q	W
Query Conservation											.	.																											.
Alig confidence											.	.										.																	.											.																						.	.
Template Conservation																						.																												.																						.	.
Template Sequence		T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	.	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	F	L	.	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	.	.	L	V	A	F	Q	K	T	F
Template Known Secondary structure									T	T				S								.							T	T		S	S																	.			T	T		T	T	S								S	S					.	.
Template Predicted Secondary structure																						.																												.																						.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	N	I	V	G	S	Q	D	G	Y	F	K	P	E	Q	R	Q	A	L	F	E	R	I	H	A	S	G	A	Q	I	V	T
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		N	L	R	L	D	Q	R	.	.	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V
Template Known Secondary structure		T							.	.			S	S														T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		127	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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