Job Description P32177 Confidence 27.47% Date Thu Jan 5 11:49:54 GMT 2012 Rank 77 Aligned Residues 83 % Identity 10% Template c3n2xB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate Resolution 2.20 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	Q	P	L	P	F	T	Q	T	F	D	L	N	K	L	D	D	A	L	R	H	L	N	D	F	Q	P	V	G	Q	L	T	G	C	T	H	A	A	A	W	M	L	P	S	G	E	L	V	G	G	H	E	D	V	G	R	H	V	A	L	D	K	L	L	G	R	R	S	Q	E	G	E	S	W	Q	Q	G	A	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	T	I	F	T	A	D	G	Q	L	D	K	P	G	T	A	A	L	I	D	D	L	I	K	A	.	.	.	.	.	.	.	.	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	Q	L	G	A	E	.	E	R	K	A	I	A	R	F	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B		T	T	S		B															T	.	.	.	.	.	.	.	.	T		S					S	S	T	T	T	T	G	G	G	S				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	V	S	S	R	A	S	Y	E	M	V	Q	K	S	A	M	C	G	V	E	I	L	F	A	V	S	A	A	.	T	T	L	A	V	E	V	A	E	R	C
Query Conservation																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	S								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions