 |
Job Description | P32177 | Confidence | 20.17% | Date | Thu Jan 5 11:49:54 GMT 2012 |
Rank | 107 | Aligned Residues | 57 |
% Identity | 16% | Template | c2yv1A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; |
PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661
|
Resolution | 1.70 Å |
|
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | E | G | E | S | W | Q | Q | G | A | V | L | V | S | S | R | A | S | Y | E | M | V | Q | K | S | A | M | C | G | V | E | I | L | F | A | V | S | A | A | . |
. |
. |
. |
. |
T | T | L | A | V | E | V | A | E | R | C | N | L | T | L | V | G |
Query Conservation |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
Template Sequence |   |
A | V | K | E | T | D | A | N | A | S | V | I | F | V | P | A | P | F | A | K | D | A | V | F | E | A | I | D | A | G | I | E | L | I | V | V | I | T | E | H | I | P | V | H | D | T | M | E | F | V | N | Y | A | E | D | V | G | V | K | I | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|