Job Description P62517 Confidence 95.65% Date Thu Jan 5 12:07:33 GMT 2012 Rank 17 Aligned Residues 165 % Identity 18% Template d1pzta_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases beta 1,4 galactosyltransferase (b4GalT1) Resolution 1.92

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	H	R	T	A	L	I	M	P	I	C	N	E	D	V	N	R	V	F	A	G	L	R	A	T	W	E	S	V	K	A	T	G	N	A	K	H	F	D	V	Y	I	L	S	D	S	Y	N	P	D	I	C	V	A	E	Q	K	A	W	M	E	L	I	A	E	V	G	G	E	G	Q	I	F	Y	R	R	R	R	R
Query Conservation
Alig confidence																	.																	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	H	K	V	A	I	I	I	P	F	R	N	R	Q	.	E	H	L	K	Y	W	L	Y	Y	L	H	P	I	L	Q	R	.	.	Q	Q	L	D	Y	G	I	Y	V	I	N	Q	A	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	F
Template Known Secondary structure			S										S	S			.																	.	.	T	T												S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																	.																	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																													.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	K	R	K	S	G	N	I	D	D	F	C	R	R	W	G	S	Q	Y	S	Y	M	V	V	L	D	A	D	S	V	M	T	G	D	C	L	C	G	L	V	R	L	M	E	A	N	P	N	A	G	I	I	Q	S	S	P	K	A	S	G	M	D	T	L	Y	A	R	C	Q	Q	F	A	T	R	V	Y	G	P	L
Query Conservation
Alig confidence					.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	A	.	K	L	L	N	V	G	F	K	E	A	L	K	D	Y	D	Y	N	C	F	V	F	S	D	V	D	L	I	P	M	N	D	H	N	T	Y	R	C	F	S	Q	P	R	H	I	S	V	A	M	D	K	F	G	F	S	L	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.														S										T	T				S	B	T	T	S			S			S	S									G	G	G	T	T	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	A	G	L	H	F	W	Q	L	G	E	S	H	Y	W	G	H	N	A	I	I	R	V	K	P	F	I	E	H	C	A	L	A	P	L	P	G	E	G	S	F	A	G	S	I	L	S	H	D	F	V	E	A	A	L	M	R	R	A	G	W	G	V	W	I	A	Y	D	L	P	G	S	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.										.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.	.										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	Q	Y	F	G	G	V	S	A	L	S	K	Q	Q	F	L	S	I	N	G	F	P	.	.	N	N	Y	W	G	A	G	G	E	.	.	.	.	D	D	D	I	Y	N	R	L	A	F	R	G	M	S	V	S	R	P	N	A	V	I	G	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	T				S												T	T	S			.	.	S				S	S	S	S		.	.	.	.											T	T				B				T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.										.	.	.	.
Template SS confidence
														287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.					.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions