 |
Job Description | P62517 | Confidence | 11.23% | Date | Thu Jan 5 12:07:33 GMT 2012 |
Rank | 69 | Aligned Residues | 31 |
% Identity | 13% | Template | c3rjoA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; |
PDBTitle: crystal structure of erap1 peptide binding domain
|
Resolution | 2.30 Å |
|
  |   |
780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | V | E | Q | A | L | N | E | T | P | E | K | L | N | R | D | R | R | L | V | L | L | S | D | P | V | T | M | A | R |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |
Template Sequence |   |
D | S | L | T | G | L | L | K | G | T | H | T | A | V | S | S | N | D | R | A | S | L | I | N | N | A | F | Q | L | V | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
618 | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|