|   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | |
|
. | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | R | T | A | L | I | M | P | I | C | N | E | D | V | N | R | V | F | A | G | L | R | A | T | W | E | S | V | K | A | T | G | N | A | K | H | F | D | V | Y | I | L | S | D | S | Y | N | . |
. |
P | D | I | C | V | A | E | Q | K | A | W | M | E | L | I | A | E | V | G | G | E | G | Q | I | F | Y | R | R | R | R | R |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|   |
| . | . |   |
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   | . | . | . | . | . | . | . |
|   |   |   |   |
Template Sequence |   |
G | K | X | A | V | I | V | P | X | K | N | E | K | L | H | L | V | D | G | V | L | K | A | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | H | K | C | P | I | I | I | V | S | N | S | K | R | E | G | P | N | R | Y | K | L | E | V | D | L | I | R | H | F | Y | N | L | T | H | . |
. |
. |
. |
. |
. |
. |
S | K | I | I | X |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | . | . |
| T | T | S |
|  |  |  |  |  |
|
|
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
110 | . | . | . | . |
  |
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 350 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | K | R | K | S | G | N | I | D | D | F | C | R | R | W | G | S | Q | Y | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | M | V | V | L | D | A | D | S | V | M | T | G | D |
Query Conservation |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|   |
|
|   |   | . | . | . |   |
|   |
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
I | H | Q | K | D | P | G | L | A | K | A | F | K | E | . |
. |
. |
V | G | Y | T | D | I | L | D | E | N | G | X | I | R | S | G | K | G | E | G | X | L | V | G | L | L | L | A | K | A | I | G | A | E | Y | V | G | F | V | D | A | D | N | Y | I | P | G | A |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |  |  |  |  |  | . | . | . | T | T |
|
| T | T | B |
| T | T | S | S | B |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
| B | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |