Job Description P62517 Confidence 99.72% Date Thu Jan 5 12:07:33 GMT 2012 Rank 1 Aligned Residues 226 % Identity 19% Template c2z86D_ PDB info PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp Resolution 2.40 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	N	P	E	H	R	T	A	L	I	M	P	I	C	N	E	D	V	N	R	V	F	A	G	L	R	A	T	W	E	S	V	K	A	T	G	N	A	K	H	F	D	V	Y	I	L	S	D	S	Y	N	P	D	I	C	V	A	E	Q	K	A	W	M	E	L	I	A	E	V	G	G	E	G	Q	I	F	Y	R	R
Query Conservation
Alig confidence																			.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Sequence		K	E	L	I	I	D	G	L	S	I	V	I	P	T	Y	N	R	.	.	.	.	.	A	K	I	L	A	I	T	L	A	C	L	C	N	Q	K	T	I	Y	D	Y	E	V	I	V	A	D	D	G	S	K	E	N	I	E	.	.	.	.	.	.	.	.	E	I	V	R	E	F	E	S	L	L	N	I	K	Y	V	R
Template Known Secondary structure																	S		.	.	.	.	.													T				S	S										S		S	S				.	.	.	.	.	.	.	.						T	T	T	T	S
Template Predicted Secondary structure																			.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390
Predicted Secondary structure																																																																				.									.	.	.	.	.
Query SS confidence																																																																				.									.	.	.	.	.
Query Sequence		R	R	R	R	V	K	R	K	S	G	N	I	D	D	F	C	R	R	W	G	S	Q	Y	S	Y	M	V	V	L	D	A	D	S	V	M	T	G	D	C	L	C	G	L	V	R	L	M	E	A	N	P	N	A	G	I	I	Q	S	S	P	K	A	S	G	M	D	.	T	L	Y	A	R	C	Q	Q	.	.	.	.	.
Query Conservation																																																																				.									.	.	.	.	.
Alig confidence																				.	.																																															.									.	.	.	.	.
Template Conservation																				.	.
Template Sequence		Q	K	D	Y	G	Y	Q	L	C	A	V	R	N	L	G	L	R	A	.	.	A	K	Y	N	Y	V	A	I	L	D	C	D	M	A	P	N	P	L	W	V	Q	S	Y	M	E	L	L	A	V	D	D	N	V	A	L	I	G	P	R	K	Y	I	D	T	S	K	H	T	Y	L	D	F	L	S	Q	K	S	L	I	N
Template Known Secondary structure						S	S													.	.			S	S							T	T					T	T													T	T										B			T	T										T	T	G	G	G
Template Predicted Secondary structure																				.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
																						391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.				.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	T	R	V	Y	G	P	L	F	T	A	G	L	H	F	W	Q	L	G	E	S	H	Y	W	G	H	N	A	I	I	R	V	K	P	F	I	E	H	C	A	L	A	P	L	P	G	E	G	S	F	A	G	S	I	L	.	.	.	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		E	I	P	E	I	I	T	N	N	Q	V	A	G	K	V	E	Q	N	K	S	V	D	W	R	I	E	H	F	K	N	T	D	N	L	R	L	C	N	T	P	F	R	F	F	S	G	G	N	V	A	F	A	K	K	W	L	F	R	.	.	.	.	.	.	.	.	.	A	G	W	F	D	E	E	F	T	H	W	G	G
Template Known Secondary structure		T	S		B							S	S	S																	T	T	T	T	T	T	T		S		G	G	G	G			T	T						G	G	G				.	.	.	.	.	.	.	.	.						T	T		S	S	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.										.	.	350	.	.	.	.	.	.	.	.	.	360
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	F	V	E	A	A	L	M	R	R	A	G	W	G	V	W	I	A	Y	D	L	P	G	S	Y	E	E	L	P	P	N	L	L	D	E	L	K	R	D
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		E	D	N	E	F	G	Y	R	L	Y	R	E	G	C	Y	F	R	S	V	E	G	.	A	M	A	Y	H	Q	E	P	P	G	T	V	Q	L	L	Q	Q	K
Template Known Secondary structure													T	T							G	G	.	G
Template Predicted Secondary structure																							.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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