 |
Job Description | P62517 | Confidence | 9.77% | Date | Thu Jan 5 12:07:33 GMT 2012 |
Rank | 80 | Aligned Residues | 89 |
% Identity | 17% | Template | c2j0bA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:beta-1,3-n-acetylglucosaminyltransferase manic fringe; |
PDBTitle: structure of the catalytic domain of mouse manic fringe in2 complex with udp and manganese
|
Resolution | 2.1 Å |
|
 |
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | E | S | V | K | A | T | G | N | A | K | H | F | D | . |
V | Y | I | L | S | D | S | Y | N | P | D | I | C | V | A | E | Q | K | A | W | M | E | L | I | A | E | V | G | G | E | G | Q | I | F | Y | R | R | R | R | R | R | V | K | R | K | S | G | N | I | D | D | F | C | R | R | W | G | S | Q | Y | S | Y | M | V | V |
Query Conservation |   |
  |   |
|
|   |   |   |
|   |   |   |   |
|   | . |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|   |   |
Template Sequence |   |
L | D | L | L | L | D | T | W | V | S | R | I | R | Q | Q | T | F | I | F | T | D | S | P | D | E | R | L | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | R | L | G | . |
. |
. |
. |
P | H | L | V | V | T | Q | C | A | L | S | C | K | M | A | A | E | F | D | A | F | L | V | . |
. |
S | G | L | R | W | F | C | H |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | G | G | G | G | S | G | G | G |  |  |  |  |  | S | S |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  | G | . | . | . | . | G | G |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |
| . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 100 | . | . | |
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
. | . | . | . | 130 | . | . | . |
  |
  |   |
345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | A | D | S | V | M | T | G | D | C | L | C | G | L | V | R | L | M | E | A | N | P | N | A | G | I |
Query Conservation |   |
|
|
|
|
|
|
|   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
V | D | D | D | N | Y | V | N | P | K | A | L | L | Q | L | L | K | T | F | P | Q | D | R | D | V | Y | V |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |
|  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|
|  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|