Job Description P62517 Confidence 32.79% Date Thu Jan 5 12:07:33 GMT 2012 Rank 37 Aligned Residues 73 % Identity 23% Template c2gkjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.					.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		D	F	C	R	R	W	G	S	Q	Y	S	Y	M	V	V	L	D	A	D	S	V	M	T	G	D	C	L	C	G	L	V	R	L	M	E	A	N	P	N	A	G	I	I	Q	S	.	.	.	.	S	P	K	A	S	G	M	D	T	L	Y	A	R	C	Q	Q	F	A	T	R	V	Y	G	P	L	F	T	A	G	L	H
Query Conservation																																															.	.	.	.
Alig confidence														.																																	.	.	.	.									.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation														.																																													.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		Q	F	S	K	M	H	G	L	G	N	D	F	.	V	V	V	D	G	V	T	Q	N	V	F	F	T	P	E	T	I	R	R	L	A	N	R	H	C	G	I	G	F	D	Q	L	L	I	V	E	A	P	Y	D	P	E	L	D	.	.	.	.	.	.	.	.	F	H	Y	R	I	F	N	A	.	.	.	.	.	.	.
Template Known Secondary structure									T	T				.						S	S	S															T	T	T	S				S									S	S	T	T	S	S	.	.	.	.	.	.	.	.								T	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																													.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	Q	L	G	E	S	H	Y	W	G	H	N	A	I
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	D	G	S	E	V	S	Q	C	G	N	G	A	R
Template Known Secondary structure		.	.	T	S				S
Template Predicted Secondary structure		.	.
Template SS confidence
				66	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions