Job Description P62517 Confidence 99.55% Date Thu Jan 5 12:07:33 GMT 2012 Rank 6 Aligned Residues 197 % Identity 14% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	T	A	L	I	M	P	I	C	N	E	D	V	N	R	V	F	A	G	L	R	A	T	W	E	S	V	K	A	T	G	N	A	K	H	F	D	V	Y	I	L	S	D	S	Y	N	P	D	I	C	V	A	E	Q	K	A	W	M	E	L	I	A	E	V	G	G	E	G	Q	I	F	Y	R	R	R	R	R	R	V
Query Conservation
Alig confidence																			.	.	.																																					.	.	.	.	.	.
Template Conservation																			.	.	.																																					.	.	.	.	.	.
Template Sequence		P	N	T	S	I	I	I	P	F	H	N	E	G	W	S	S	L	.	.	.	L	R	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P	L	E	.	.	.	.	.	.	D	Y	M	A	L	F	P	S	V	R	I	L	R	T	K	K	R	E
Template Known Secondary structure											S	S							.	.	.											S		G	G	G										S				G	G	G	T					.	.	.	.	.	.				T	T	S	T	T							S	S
Template Predicted Secondary structure																			.	.	.																																					.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	S	G	N	I	D	D	F	C	R	R	W	G	S	Q	Y	S	Y	M	V	V	L	D	A	D	S	V	M	T	G	D	C	L	C	G	L	V	R	L	M	E	A	N	P	N	A	G	I	I	Q	S	S	P	K	A	S	G	M	D	T	L	Y	A	R	C	Q	Q	F	A	T	R	V	Y	G	P	L	F	T
Query Conservation
Alig confidence			.												.	.																																	.															.	.	.	.	.	.	.
Template Conservation			.												.	.																																	.															.	.	.	.	.	.	.
Template Sequence		G	.	L	I	R	T	R	M	L	G	A	S	V	.	.	A	T	G	D	V	I	T	F	L	D	S	H	C	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	N	R	K	.	T	I	V	C	P	M	I	D	V	I	D	H	D	D	.	.	.	.	.	.	.	F	R	Y	E	T	Q	A	G	D	A	M
Template Known Secondary structure			.												.	.			S	S							S	S					T	T		S											T	T	.												T	T	T	.	.	.	.	.	.	.							T	T	S	S
Template Predicted Secondary structure			.												.	.																																	.															.	.	.	.	.	.	.
Template SS confidence
		216		.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.
		402	.	.	.	.	.	.	.																					410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.				.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Query Sequence		A	G	L	H	F	W	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	H	Y	W	G	H	N	A	I	I	R	V	K	P	F	I	E	H	C	A	L	A	P	L	P	G	E	G	S	F	A	G	S	I	L	.	.	.	S	H	D	F	V	E	A	A	L	M	R	R
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	A	F	D	W	E	M	Y	Y	K	R	I	P	I	P	P	E	L	Q	K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	.	.	.	.	.	.	.	.	.	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M
Template Known Secondary structure							T	T										T	T	T			S	S	T	T	S					S	S			S	S	S											.	.	.	.	.	.	.	.	.	T	T	S	S		T	T			S	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.										.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		459	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	W	G	V	W	I	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	G	G	R	M	E	D	I	P
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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