Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG30
Confidence96.43%DateThu Jan 5 11:27:58 GMT 2012
Rank107Aligned Residues89
% Identity11%Templatec3te6A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190......... 200.........210...... ...220.........230.........240..
Predicted Secondary structure 












.....





.





Query SS confidence 






























. . . . .
















.

























Query Sequence  GRGQRGLIVAPPKAGKTMLLQNIAQSIAYNH. . . . . PDCVLMVLLIDERPEEV. TEMQRLVKGEVVASTFDEPASRHVQV
Query Conservation 




 

 
  
 





  

       .....     
  




  

. 
        

 

 
        
Alig confidence 






























.....
















.














..........
Template Conservation       
 
 
 





  
  
   
              
          
   
   
        .......... 
Template Sequence  SQNKLFYITNADDSTKFQLVNDVXDELITSSARKELPIFDYIHIDALELXDALYEKIWFAISKENGDIS. . . . . . . . . . L
Template Known Secondary structure  T





STTTTTSS

TT


S






..........
Template Predicted Secondary structure 
























..........
Template SS confidence 















































































   570.........580.........590.........600.........610.........620.........630........ .
 
   243......250.........260.......
Predicted Secondary structure 



Query SS confidence 
























Query Sequence  AEMVIEKAKRLVEHKKDVIILLDSI
Query Conservation 
      

   
 





  


Alig confidence 
























Template Conservation    
               





 
Template Sequence  EALNFYITNVPKAKKRKTLILIQNP
Template Known Secondary structure  S
GGGS


Template Predicted Secondary structure 



Template SS confidence 
























   644.....650.........660........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions